Pseudomonas asiatica: LG197_24645
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Entry
LG197_24645 CDS
T08841
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
pasi
Pseudomonas asiatica
Pathway
pasi00020
Citrate cycle (TCA cycle)
pasi00190
Oxidative phosphorylation
pasi00650
Butanoate metabolism
pasi00720
Other carbon fixation pathways
pasi01100
Metabolic pathways
pasi01110
Biosynthesis of secondary metabolites
pasi01120
Microbial metabolism in diverse environments
pasi01200
Carbon metabolism
Module
pasi_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pasi_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pasi_M00149
Succinate dehydrogenase, prokaryotes
pasi_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
pasi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LG197_24645 (sdhA)
00650 Butanoate metabolism
LG197_24645 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
LG197_24645 (sdhA)
00720 Other carbon fixation pathways
LG197_24645 (sdhA)
Enzymes [BR:
pasi01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
LG197_24645 (sdhA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
DAO
Pyr_redox_2
GIDA
FAD_binding_3
FAD_oxidored
Thi4
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
WDM87753
LinkDB
All DBs
Position
complement(5295290..5297062)
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AA seq
590 aa
AA seq
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MASIPTISFDAIIIGGGGAGMRAALQLAQGGHKTAVVTKVFPTRSHTVSAQGGITCAIAS
ADPNDDWRWHMYDTVKGSDYIGDQDAIEYMCQEGPAAVFELDHMGLPFSRTETGRIYQRP
FGGQSKDFGKGGQAARTCAASDRTGHALLHTLYQGNLKAGTTFLNEYYAVDLVKNQDGAF
VGVIAICIETGETLYIKSKATVLATGGAGRIYASTTNALINTGDGVGMALRAGVPVQDIE
MWQFHPTGIAGAGVLVTEGCRGEGGYLINAHGERFMERYAPNAKDLAGRDVVARSMVKEI
IAGNGVGPNKDHVLLKLDHLGEEVLHSRLPGICELSKTFAHVDPVVAPVPVIPTCHYMMG
GVATNIHGQAITMDAEGNDHIIPGLFAVGEVACVSVHGANRLGGNSLLDLVVFGRAAGLH
LEKALTEGVEYRDASDTDVDVALNRLNKLNERTTGEDVASLKRELQSCMQNYFGVFRTGE
YMQKGIEQLAGLRDRIANVKINDKSQAFNTARIEALELQNLLEVAEATAIAAEARKESRG
AHAREDYEDRDDENWLCHTLYYPGEKRVAKRGVNFAPKTVPAFEPKVRTY
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggctagcattccaaccatttccttcgacgccatcatcatcggtggcggcggcgccggc
atgcgcgctgcgctgcagctggctcaaggcggccacaagactgccgtagtcaccaaggtc
ttcccgacccgttcgcacactgtatccgcccagggcggcatcacctgcgccatcgcttcg
gccgacccgaacgacgactggcgctggcacatgtacgataccgtcaagggctccgactac
atcggtgaccaggacgctatcgaatatatgtgtcaggaaggcccggctgcggtcttcgag
ctggaccacatgggcctgccgttctcgcgtaccgaaaccggtcgcatctaccagcgtccg
ttcggtggccagtccaaggacttcggtaaaggtggccaggctgcccgtacctgcgccgct
tccgaccgtaccggtcacgcgctgctgcacaccctgtaccagggcaacctgaaagccggc
accaccttcctcaacgagtactacgcagttgacctggtgaagaaccaggacggcgcattc
gttggcgtgatcgcgatctgcatcgaaaccggcgagaccctgtacatcaagtccaaggcc
accgtgctggcaactggcggtgccggccgtatctacgcctccaccaccaacgccctgatc
aacaccggtgacggcgtgggcatggccctgcgtgccggcgtgccggtgcaggacatcgaa
atgtggcagttccacccgaccggcatcgccggcgccggtgtactggtcaccgaaggttgc
cgcggtgagggtggctacctgatcaacgcccacggcgagcgcttcatggagcgttacgcg
ccgaacgcgaaagacctggccggtcgcgacgtggtcgcccgttccatggtcaaggaaatc
atcgccggcaacggcgtgggcccgaacaaggaccacgtactgctgaagctggaccacctg
ggcgaggaagtgctgcacagccgcctgccaggtatctgcgagctgtccaagaccttcgcc
cacgtcgaccctgtggtcgcgccggtaccggtcatcccgacctgccactacatgatgggc
ggcgttgccaccaacattcatggccaggccattaccatggacgccgaaggcaacgaccac
atcatcccgggcctgttcgccgtaggtgaagtggcgtgcgtatctgttcacggtgccaac
cgcctgggcggcaactcgctgctcgacctggtggtgttcggccgtgctgccggcctgcac
ctggagaaggcgctgaccgaaggcgtggaataccgcgacgccagcgacaccgacgtcgat
gttgccctgaaccgcctgaacaagctgaacgagcgcaccaccggtgaagacgttgccagc
ctgaagcgcgagctgcagagctgcatgcagaactacttcggtgtattccgtactggcgaa
tacatgcagaagggtatcgagcagctggccggtctgcgtgaccgtatcgccaacgtcaag
atcaacgacaagtcccaggccttcaacaccgcgcgtatcgaagcgctggagctgcagaac
ctgctggaagtcgccgaagctaccgccatcgcggcagaagcccgtaaagagtcccgcggc
gctcacgcccgtgaagactacgaagaccgtgacgacgaaaactggctgtgccacaccctg
tactacccgggtgagaagcgcgtcgccaagcgtggcgtcaactttgcgccgaagactgtt
ccagccttcgaaccaaaagtccggacttactaa
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