Pseudomonas asiatica: LG197_27575
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Entry
LG197_27575 CDS
T08841
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
pasi
Pseudomonas asiatica
Brite
KEGG Orthology (KO) [BR:
pasi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pasi03021
]
LG197_27575 (rapA)
Transcription machinery [BR:
pasi03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
LG197_27575 (rapA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
WDM88288
LinkDB
All DBs
Position
5919448..5922294
Genome browser
AA seq
948 aa
AA seq
DB search
MAQQYQPGQRWISDSEAELGLGTILAQDGRLLTVLYPATGDTRQYSLRNAPLTRVRFSPG
DQITHFEGWKLTVREVEDIDGLMVYHGLDGQNQPRTLPETQLSNFIQFRLASDRLFAGQI
DPLSWFSLRYNTLQHTSKQMQSALWGLGGCRAQPIAHQLHIAREVADRSAPRVLLADEVG
LGKTIEAGLVIHRQLLSGRASRVLILVPENLQHQWLVEMRRRFNLQVALFDAERFIESDA
SNPFEDAQLALVALEWLVEDEKAQDALFAAGWDLMVVDEAHHLVWHEDQVSAEYGLVEQL
AQVIPGVLLLTATPEQLGQDSHFARLRLLDPNRFHDLAAFRAESEHYRPVAEAVQELLDE
GRLSPKAHATIQGFLGAEGEALLAAVSDSDTQASARLIRELLDRHGTGRVLFRNTRAAIQ
GFPERQLHPYPLATPEQYRDLPAGEHAELYPEVAFQAQGEVADDERWWRFDPRVDWLIDT
LKMLKRTKVLVICAHAETAMDLEDALRVRSGIPASVFHEGMSILERDRAAAYFADEEFGA
QVLICSEIGSEGRNFQFAHHLVMFDLPAHPDLLEQRIGRLDRIGQKHTIQLHIPYLQDSP
QERLFQWYHEGLNAFLNTCPTGNALQHQFGPRLLPLLEGGESKAWEALVADARSERERLE
AELHTGRDRLLELNSGGAGEGQALVEDILEQDDQFALPIYMETLFDAFGIDSEDHSENAL
ILKPSEKMLDASFPLGDDEGVTITYDRGQALSREDMQFLTWEHPMVQGGMDLVLSGSMGN
TAVALIKNKALKPGTVLLELLFVSEVVAPRSLQLGRYLPPAALRCLLDANGNDLASRVAF
ETLNDQLESVPRASANKFVQAQRDVLAQRIGSGEAKVMPAHVERVAEAQRRLKAEADEEL
ARLVALQAVNPSVRDSEIEALRKQREEGLAMLEKAALRLEAIRVLVAG
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcagtatcaaccggggcaacgctggatcagcgacagcgaagccgagctcggc
ctgggtaccatcctggcgcaggatggccgcctgttgaccgtgctctacccggccactggc
gacacccgccagtattccctgcgcaatgcgccgctgacccgcgtgcgcttctcgccaggt
gaccagatcacccacttcgaaggctggaagttgaccgtgcgcgaggtcgaggacatcgac
gggctgatggtctaccacggcctggacgggcagaaccagccgcgcaccctgccagaaacc
cagttgtcgaacttcatccagttccgcctggccagcgaccgcctgttcgccgggcagatc
gacccgctctcgtggttcagcctgcgctacaacaccctgcagcacaccagcaagcagatg
cagtcggcgctgtggggcctgggcggctgccgtgcccaacccatcgcccaccagttgcac
atcgcccgcgaagtcgccgaccgcagcgcgccacgcgtcttgttggccgacgaagtaggc
ctgggcaaaaccatcgaagccggcctggtgatccatcgccagctgctgtctggccgcgcc
agccgcgttctgatcctggtaccggaaaacctccagcaccagtggctggtggaaatgcgc
cgccgcttcaacctgcaggtggccctgttcgacgccgagcgtttcatcgaaagcgacgcc
agcaacccgttcgaggatgcccagctggcgctggtggcactggagtggctggtagaagac
gaaaaggcccaggacgcgctgttcgccgctggctgggacctgatggtggtggacgaagcc
caccacctggtctggcacgaagaccaggtcagcgccgaatacggcctggtcgaacagctg
gcccaagtgatcccgggcgtgctgctgctcacggccacccccgagcagctcggccaggac
agccacttcgcccgcctgcgcctgctcgaccccaaccgtttccacgacctggccgccttc
cgcgccgagagcgagcactatcgcccggtggctgaagccgtacaggaactgctcgacgaa
ggccgcctgtcgcccaaggcccacgccaccatccagggcttcctgggtgccgaaggcgaa
gccctgctggccgcggtcagcgacagcgatacccaggccagcgcgcgcctgatccgtgag
ctgctcgaccgccacggcaccggccgcgtgctgttccgtaacacccgcgcggcgatccag
ggcttccctgagcgccagctgcacccttacccactggcgacgcccgagcagtaccgcgac
ctgccagccggcgaacatgccgagctgtacccggaagtcgccttccaggcccagggcgag
gtggccgatgacgagcgctggtggcgtttcgacccgcgcgtcgactggctgatcgacacc
ctgaagatgctaaagcgtaccaaggtgctggtgatctgcgcccatgccgaaaccgcgatg
gacctggaggacgccctgcgcgtgcgctccggcatcccggcctcggtgttccatgagggc
atgagcatcctagaacgtgaccgcgccgccgcctacttcgctgacgaagagttcggcgcg
caggtgctgatctgctccgagatcggcagtgaaggccgcaacttccagtttgcccaccat
ctggtgatgttcgacctgccggcgcaccccgacctgctcgaacagcgcatcggccgcctc
gaccgtatcggccagaagcacaccatccagctgcatatcccgtacctgcaggacagcccg
caagagcgcctgttccagtggtaccacgaaggcctcaacgccttcctcaacacctgccct
accggcaacgccctgcagcaccagttcggcccgcgcctgctgccactgcttgaaggtggc
gaaagcaaggcctgggaagccctggtggccgacgcccgcagcgaacgcgaacgcctggaa
gccgaactgcataccggccgtgaccgtctgctggagctcaactccggcggtgccggcgaa
ggccaggcgctggtcgaggacattctcgaacaggacgaccagttcgccctgccgatctac
atggaaaccctgttcgacgccttcggcatcgacagcgaagaccattccgagaacgccctg
atcctcaagccgagcgaaaagatgctcgacgccagcttcccgctgggtgacgacgaaggc
gtgaccatcacctacgaccgtggccaggcgctgtcgcgcgaggacatgcagttcctcacc
tgggaacacccgatggtacaaggcggcatggatctggtgctgtccggctcgatgggcaac
accgccgtggcgctgatcaagaacaaggcgctcaaacccgggaccgtgctgcttgaactg
ctgttcgtcagcgaggtggtggcaccgcgcagcctgcaactggggcgttacctgccaccg
gcggcattgcgctgcctgctcgatgccaacggcaacgacctggcgtcccgcgtggccttc
gaaaccctcaacgaccagctggaaagcgtgccacgcgccagcgccaacaagttcgtccag
gcccagcgtgacgtgctggcccagcgcatcggcagcggcgaggccaaggtcatgccggcc
cacgtcgagcgcgtggccgaggcccagcgccgccttaaagcggaggccgacgaagaactg
gcccgtctggtcgccctgcaagcggtcaacccgagcgtgcgcgacagcgagatcgaagcg
ctgcgcaagcagcgcgaagagggcctggcgatgctggaaaaggccgccctgcgcctggaa
gccattcgcgtgctggtggctggctaa
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