Pseudomonas asiatica: LG197_27930
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Entry
LG197_27930 CDS
T08841
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K17061
two-component system, response regulator AauR
Organism
pasi
Pseudomonas asiatica
Pathway
pasi02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pasi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LG197_27930
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pasi02022
]
LG197_27930
Two-component system [BR:
pasi02022
]
Other families
AauS-AauR (acidic amino acids utilization)
LG197_27930
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
AAA_16
HTH_50
Mg_chelatase
AAA_2
AAA
AAA_3
Motif
Other DBs
NCBI-ProteinID:
WDM88358
LinkDB
All DBs
Position
5998986..6000314
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AA seq
442 aa
AA seq
DB search
MNQAPLTVLIVEDDPHVLLGCQQALALEDIACEGVGSAEQALERIGDDFAGIVVSDIRLP
GIDGLELLNRLKARDRSLPVVLITGHGDIDMAVGAMRNGAYDFMEKPFSPERLVDVVRRA
LEQRGLSREVVALRRQLAEQSSLEGRIIGRSPAMEHLRELIANVADTSANVLIEGETGTG
KELVARCLHDFSRRQGQPFVALNCGGLPENLFESEIFGHEANAFTGAGKRRIGKIEHANG
GTLFLDEVESMPINLQIKLLRVLQERTLERLGSNQSIPVDCRVIAATKSDLDAMGQSGQF
RSDLYYRLNVVTLELPPLRERREDILQLFEHFLQQSALRFDRETPALDSQTLSRLMAHDW
PGNVRELRNVAERYALGLPAFKKGPSGGASQGLGFAEAVEAFERNLLSDALQRTGGNLSQ
ASQELGMAKTTLFDKVKKYGLG
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaagcgcctcttaccgtcctgatcgtcgaagacgacccgcatgtgctgctcggc
tgccaacaggcgctggccctggaagacatcgcctgtgaaggtgtgggcagcgccgagcag
gcgctggagcgcatcggcgacgacttcgccggcatcgtcgtcagcgatatacgcctgccg
ggcatcgatggcctggagctgctcaaccgcctcaaggcccgcgaccgcagcctgccggtg
gtactgatcaccggccacggcgatatcgacatggcggtgggcgccatgcgcaatggcgcc
tacgacttcatggaaaaacccttctccccggagcgcctggtcgacgtggtgcgccgcgcc
ctcgaacagcgcgggctgtcgcgcgaagtggtggccctgcgccgccaattggcggagcaa
agcagcctggaggggcgcatcattggccgttcgccggccatggagcacctgcgcgagctc
atcgccaacgtcgccgatacctcggccaacgtgctgatcgaaggcgaaaccggtaccggc
aaggaactggtcgcccgctgcctgcacgacttcagccgtcgtcagggccagccgttcgtg
gcacttaactgtggcggcttgccggaaaacctgttcgaaagcgagattttcggccacgag
gccaacgccttcaccggtgccggcaaacgccgcatcggcaagatcgaacatgccaatggc
ggcacgctgttcctcgacgaagtggagagcatgccgatcaacctgcagatcaagctgttg
cgtgtgctgcaggagcgcaccctggagcggctgggctcgaaccagagcattccggtggac
tgccgggtgatcgccgccaccaagtctgacctggatgccatgggccagagtggccagttc
cgcagcgacctgtattaccggctgaacgtggtgacactggagctgccaccgctgcgcgag
cgccgcgaagatatcctgcagctgttcgaacacttcctgcagcagtcggccctgcgcttc
gaccgtgaaacacctgcgctggacagccagaccctgtcgcgcctgatggcccacgactgg
ccgggcaacgtgcgtgagctgcgcaacgtcgccgaacgctatgccctcggcctgcctgcg
ttcaagaaaggccccagcggtggtgccagccaaggcttgggctttgccgaggcggtggaa
gcgttcgagcgcaacctgctcagcgatgccctgcaacgtactggtggcaacctgagccag
gccagccaggagctgggcatggccaagaccacgctgttcgacaaagtgaagaaatacggc
ctcggctga
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