Pseudomonas alabamensis: APT63_02255
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Entry
APT63_02255 CDS
T12030
Name
(GenBank) geranyl transferase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
pass Pseudomonas alabamensis
Pathway
pass00900
Terpenoid backbone biosynthesis
pass01100
Metabolic pathways
pass01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pass00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
APT63_02255
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pass01006
]
APT63_02255
Enzymes [BR:
pass01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
APT63_02255
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
APT63_02255
2.5.1.29 geranylgeranyl diphosphate synthase
APT63_02255
Prenyltransferases [BR:
pass01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
APT63_02255
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
AMA44532
LinkDB
All DBs
Position
complement(482528..483415)
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AA seq
295 aa
AA seq
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MIAAYQAKCQAQVDAALEPLFQAPSPELERLYAAMRYSVMNGGKRVRPLLAYAACEALGA
DGQRANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLA
FSALLDPRLNTQDADTSLAMVRALAEAAGSAGMVGGQAIDLGSVGLKLDQQALEYMHRHK
TGALIEASVRLGALASGRASASQLAALQTYAQAIGLAFQVQDDILDIESDTATLGKHQGA
DLARDKPTYPALLGLPAAKAYAVELRDQALVALEGFGESAEPLRALACYIVERRH
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgatcgccgcctaccaggccaagtgccaggcccaggtcgatgcggccctggagccgctg
ttccaggccccctcgcccgaactcgagcggttgtacgccgccatgcgctacagcgtcatg
aacggcggcaagcgggtccgtccgctgctggcctatgccgcctgcgaagcgctgggcgcc
gacgggcagcgcgccaacggtgcggcctgcgcggtggagctgatccacgcctactcgctg
gtgcacgatgacttgccggccatggacgacgacgacctgcgccgtggccagccgaccacg
cacaaggcttttgacgaagcctgcgcgatcctggccggcgacggcttgcagagcctggcc
ttcagtgccctgctcgacccgcgcctgaatacccaggacgccgacaccagcctggccatg
gtccgtgccctggccgaggccgctggttcggcgggcatggtcggcggccaggccatcgac
ctgggctcggtgggcctgaagctcgaccagcaggccctggaatacatgcaccgccacaag
accggcgcgttgatcgaagccagcgttcgcctaggcgccctggccagcggtcgggccagc
gcgagccagttggcggcgttgcagacctatgcccaggcgatcggcctggccttccaggtg
caggacgatatcctcgacatcgagagcgacacggcgaccctgggcaagcaccagggcgcc
gacctggctcgcgacaaaccgacctacccggcgctgctgggcttgccggcggccaaggcc
tacgccgtggaactgcgcgaccaggccctggtcgcactggaaggtttcggcgagtctgcc
gagccgctgcgggcgttggcctgctacatcgtcgagcgccgtcactga
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