KEGG   Pseudomonas alabamensis: APT63_12705
Entry
APT63_12705       CDS       T12030                                 
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase
  KO
K00239  succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
Organism
pass  Pseudomonas alabamensis
Pathway
pass00020  Citrate cycle (TCA cycle)
pass00190  Oxidative phosphorylation
pass00650  Butanoate metabolism
pass00720  Other carbon fixation pathways
pass01100  Metabolic pathways
pass01110  Biosynthesis of secondary metabolites
pass01120  Microbial metabolism in diverse environments
pass01200  Carbon metabolism
Brite
KEGG Orthology (KO) [BR:pass00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    APT63_12705 (sdhA)
   00650 Butanoate metabolism
    APT63_12705 (sdhA)
  09102 Energy metabolism
   00190 Oxidative phosphorylation
    APT63_12705 (sdhA)
   00720 Other carbon fixation pathways
    APT63_12705 (sdhA)
Enzymes [BR:pass01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.5  With a quinone or related compound as acceptor
    1.3.5.1  succinate dehydrogenase
     APT63_12705 (sdhA)
SSDB
Motif
Pfam: FAD_binding_2 Succ_DH_flav_C HI0933_like DAO Pyr_redox_2 GIDA FAD_binding_3 FAD_oxidored Thi4 Pyr_redox_3
Other DBs
NCBI-ProteinID: AMA46408
LinkDB
Position
complement(2944538..2946310)
AA seq 590 aa
MASLPTISFDAIIIGGGGAGMRAALQLAQGGHKTAVVTKVFPTRSHTVSAQGGITCAIAS
ADPNDDWRWHMYDTVKGSDYIGDQDAIEYMCQEGPAAVFELDHMGLPFSRTETGRIYQRP
FGGQSKDFGKGGQAARTCAASDRTGHALLHTLYQGNLKAGTTFLNEYYAVDLVKNQDGAF
VGVIAICIETGETMYIKAKATVLATGGAGRIYASTTNALINTGDGVGMALRAGVPVQDIE
MWQFHPTGIAGAGVLVTEGCRGEGGYLINKHGERFMERYAPNAKDLAGRDVVARSMVKEI
IAGNGCGPDGDHVMLKLDHLGEEVLHSRLPGICELSKTFAHVDPVVAPVPVVPTCHYMMG
GVATNIHGQAITMDANGVDQIIPGLFAVGEVACVSVHGANRLGGNSLLDLVVFGRAAGLH
LEKALSEGVQYRDASDTDVDVALNRLAKLNERTTGEDVASLKRELQSCMQNYFGVFRTGE
YMQKGIAQLQGLRERISNVKINDKSQAFNTARIEALELQNLLEVAEATAIAAETRKESRG
AHAREDFEDRDDENWLCHTLYFPGEKRVAKRAVNFAPKTVPAFEPKVRTY
NT seq 1773 nt   +upstreamnt  +downstreamnt
atggctagtcttccaaccatttccttcgacgccatcatcatcggtggcggcggcgccggc
atgcgcgcggcgctgcaactggctcagggcggccacaagaccgccgtggtcaccaaggtc
ttcccgacccgttcgcacaccgtgtccgcccagggcggcatcacctgcgcgatcgcctcg
gccgacccgaacgacgactggcgctggcacatgtacgacaccgtcaagggttccgactac
atcggtgaccaagacgccatcgaatacatgtgccaggaaggcccggctgcggtcttcgag
ctggaccacatgggcctgccgttctcgcgcaccgagaccggtcgcatctaccagcgtccg
ttcggtggccagtccaaggacttcggcaagggcggccaggccgcacggacctgcgcagcc
tccgaccgtaccggtcacgcgctgctgcacaccctgtaccagggcaacctgaaggccggc
accaccttcctgaacgaatactacgcggtcgatctggtgaagaaccaggacggcgcgttc
gtcggtgtgatcgcgatctgcatcgaaaccggcgaaaccatgtacatcaaggccaaggcc
accgtactggccaccggcggtgccggtcgtatctacgcctcgaccaccaacgccctgatc
aacaccggcgacggtgtcggcatggcgctgcgcgctggcgtgccggtgcaggacatcgag
atgtggcagttccacccgaccggcatcgccggcgccggtgtactggtcaccgaaggctgc
cgtggtgaaggcggttacctgatcaacaagcacggcgaacgcttcatggagcgttacgcg
ccgaacgccaaagacctcgccggtcgcgacgtcgtggcccgctcgatggtcaaggaaatc
atcgccggcaacggctgtggcccggatggcgaccacgtcatgctcaagctcgaccacctg
ggcgaggaagtgctgcacagccgcctgcctggtatctgcgagctgtccaagaccttcgcc
cacgtcgaccctgtcgtcgcgccggtcccggtcgttccgacctgccactacatgatgggc
ggcgtagccaccaacatccatggccaggcgatcaccatggacgccaatggcgtcgaccag
atcatcccgggcctgttcgccgtcggcgaagtggcgtgcgtgtcggtccacggtgccaac
cgtctgggcggcaactcgctgctcgacctggtggtcttcggccgtgccgcgggtctgcac
ctggaaaaagccctgagcgaaggcgtgcagtaccgtgacgccagcgacaccgacgtcgac
gtggcgctgaaccgtctggccaagctgaacgagcgcaccaccggcgaagacgtcgccagc
ctcaagcgcgagctgcagagctgcatgcagaactacttcggcgtgttccgtaccggcgag
tacatgcagaagggcatcgcccagctgcaaggcctgcgcgagcgtatctcgaacgtcaag
atcaacgacaagtcgcaggcattcaataccgcccgcatcgaagcgttggaactgcagaac
cttctggaagtcgcagaagctaccgccatcgcggccgaaacccgtaaggagtcccgcggc
gctcacgcccgtgaagacttcgaagaccgtgacgacgaaaactggctgtgccataccctg
tacttccccggggagaagcgggttgccaagcgtgcagtcaactttgcgccgaagaccgtt
ccggccttcgaacctaaagtccggacttactaa

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