Pseudomonas alabamensis: APT63_18720
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Entry
APT63_18720 CDS
T12030
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
pass Pseudomonas alabamensis
Pathway
pass03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pass00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
APT63_18720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pass03400
]
APT63_18720
Enzymes [BR:
pass01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
APT63_18720
DNA repair and recombination proteins [BR:
pass03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
APT63_18720
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Zn_ribbon_PriA
Helicase_C
AAA_30
Zn_ribbon_6
AAA_16
HypA
iSirtuin
TrwB_AAD_bind
WHD_PriA
Zeta_toxin
PIF1
Zn_Ribbon_YjdM
Motif
Other DBs
NCBI-ProteinID:
AMA47498
LinkDB
All DBs
Position
4378932..4381151
Genome browser
AA seq
739 aa
AA seq
DB search
MPDVILRLALPSPLRRLFDYRAPPGTSGKTFVPGMRLRVPFGRRELIGILVEVTDTSDVP
PDKLRPATALLDPVSPLPSPLLKLCLWTAQYYQHSLGDTFNWALPTLLRQGEPAEMRQER
FWQIAPGARLDDPRIARAPRQREALQTLAQHPHGVAHAVLSKLGLSKDSLDLLLAKQLVE
IELRRHLPAARHEHWLAQPELPLNEEQRAAFDAVRSSFGGFQAFLLAGVTGSGKTEVYLQ
LIRETLEAGKQALVLIPEINLGPQTLARFEQRFNARIALLHSAVNDRERLDAWLAARDGE
ADIIIGTRSALFTPMKHPGLIIIDEEHDGSYKQQEGLRYHARDLALVRARQEDVPILLGS
ATPSLESLHNAHGGRYGLLRMHQRAGGARQPRFLRLDVKSRPLDSGISGPLQQAIGQTLA
AGQQVLVFLNRRGFAPTLLCHDCGWLSGCPRCDARMTVHQRSGLLRCHHCGHEERIPHQC
PQCNHVDLRPVGAGTERAEERLSTLFPEYPVLRVDRDSTARKDAMQNLFATIQRGQPCIL
VGTQMLAKGHHFPRVTLVAILDADGGLFSGDFRASEHMAQLIVQVAGRAGRAEEPGKVIV
QTHLAEHPLLVQLTEQGYFAFADQALSERRAASLPPFSHLALLRAEAHKPGQAEAFLDEA
CTAAERLLAAQGASGIELLGPVPAPMERRAGRYRAQLLLQANARAALHRLLASWLLELEQ
MPSGRQVRWSLDVDPVDLY
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgacgtcatcctgcgccttgcccttccttcgccgttgcgcaggttgttcgactac
cgtgcgccacccggaacctcgggcaagacctttgtaccaggcatgcggctgcgcgtgccg
ttcggtcggcgcgaactgatcggcattctggtcgaggtgaccgacaccagtgacgtgccg
cccgacaagctgcgtccggccacggcgctgctcgatccggtctcgcccctgccctcaccc
ttgctcaagctgtgcctgtggacggcgcagtactaccagcacagcctgggcgacaccttc
aactgggccttgccgactttgttgcgccaaggtgaaccggccgagatgcgtcaggagcgg
ttctggcagatcgcccccggcgcgcgcctggacgacccgcgcatcgcccgagcgccccgc
cagcgcgaagccttgcagacactggcgcagcacccccacggcgtggcccacgcggtgctg
agcaagctgggcctgagcaaggacagcctcgacctgctgctggccaagcaactggtcgag
atcgaactgcgccgtcacctgcctgccgcgcgccacgaacactggctcgcccagcctgag
ctgccgctgaacgaagaacagcgcgccgcgttcgacgccgtgcgctcctcgttcggcggc
ttccaggcgtttctcctggcgggggtgaccggcagcggcaagaccgaggtgtacctgcaa
ctgatccgcgaaacccttgaggccggcaagcaggcgctggtgctgatccccgagatcaac
ctggggccacagaccctggcgcgcttcgaacaacgcttcaatgcacgcatcgccctgctg
cattcggcggtcaacgaccgcgagcggctcgatgcctggctcgcggcgcgcgatggcgag
gcggacatcatcatcggcacgcgctcggcgctgttcacaccgatgaagcacccgggcctg
atcatcatcgacgaagagcacgatggctcctataaacagcaggaaggcctgcgctaccac
gcccgggatctggcgctggtgcgtgcgcgccaggaagacgtgccgatcctgctcggttcg
gccaccccgtcgctggaaagcctgcacaacgcccacggcggccgctacggcctgctgcgc
atgcaccagcgcgccggtggcgcccggcagccacgcttcctgcgcctggacgtcaagagc
cggcccctggacagcggcatcagcggccctctgcaacaggccatcggccagaccctcgcg
gccgggcagcaggtactggtcttcctcaaccgacgcggcttcgcgccgaccctgctgtgc
catgactgcggctggctgtccggctgcccgcgttgcgatgcgcgcatgaccgtgcaccag
cgctcgggattgctgcgctgccatcattgcggccacgaagagcgcatcccgcaccagtgc
ccacagtgcaaccatgtggacctgcgcccggtcggcgcaggcaccgagcgggccgaagag
cgcctgagcacgctgttcccggaatacccggtgctgcgcgtggaccgcgacagcaccgcg
cgcaaggacgccatgcagaacctgttcgccaccatccagcgaggccagccctgcatcctg
gtcggcacccagatgctcgccaaggggcaccacttcccacgggtgaccctggtggcgatc
ctggacgccgacggtggtctgttctcgggcgatttccgcgccagcgagcacatggcgcag
ctgatcgtgcaggtggccggccgcgccggacgggccgaggagcccggcaaggtgatcgtg
cagacacacctggccgagcaccccttgctggtgcaactgaccgagcaggggtacttcgcc
ttcgccgaccaggccttgagcgagcgccgggcggcaagcttgccgcctttctcccacctg
gccctgctgcgcgccgaagcgcacaagccgggtcaggccgaagccttcctcgacgaagcc
tgcacggcggccgagcgcctgctcgccgcgcagggtgccagcggtatcgaactgctcgga
ccggtcccggcccccatggagcgtcgcgcgggtcgctaccgcgctcaactgctgctgcaa
gccaatgccagggccgccttgcaccgtctgctcgccagctggctgctggaactcgagcag
atgccttcgggccgtcaggtccgctggtcgctcgacgtggaccctgtggatctttattga
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integrated database retrieval system
