Pseudomonas asturiensis: N015_01105
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Entry
N015_01105 CDS
T08470
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
past
Pseudomonas asturiensis
Pathway
past03420
Nucleotide excision repair
past03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
past00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
N015_01105 (uvrD)
03430 Mismatch repair
N015_01105 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
past03400
]
N015_01105 (uvrD)
Enzymes [BR:
past01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
N015_01105 (uvrD)
DNA repair and recombination proteins [BR:
past03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
N015_01105 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
N015_01105 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_12
Viral_helicase1
AAA_11
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QHF01077
LinkDB
All DBs
Position
complement(240990..243173)
Genome browser
AA seq
727 aa
AA seq
DB search
MRDDLSLLLNSLNDAQRQAVAASLGRQLVLAGAGSGKTRVLVHRIAWLMQVEQASPHSVL
SVTFTNKAAAEMRHRIEQLMGISPAGMWVGTFHGLAHRLLRAHWQEAGLVQTFQILDSDD
QQRVVKRVIRDLGLDEQRWPARQAQWFINGQKDEGLRPQHIQASGDLFLTTMRSIYEAYE
AACQRAGVIDFSELLLRALDLWRDNPGLLAHYQRRFRHVLVDEFQDTNAVQYAWLRLLAQ
GGDSLMVVGDDDQSIYGWRGAKIENIHQYSSDFPDTEVIRLEQNYRSTASILKAANGLIV
NNSGRLGKELWTDVGDGELISLYAAFNEHDEARYVVETIESVLKTGTSRNDIAILYRSNA
QSRVLEEALLRERIPYRIYGGQRFFERAEIKNAMAYLRLLEGRGNDAALERVINVPARGI
GEKTVEAIREHARHADVSMWEAMRLLVANKGLTGRAATALGGFIELIENLSAKVMEMPLH
LMTQTVIEQSGLITYHEQEKGEKGQARVENLEELVSAARAFENTESEEDLTPLAAFLGHA
SLEAGDTQAQEHEESIQLMTLHSAKGLEFPHVFLVGMEEGLFPHKMSLEEPGRLEEERRL
AYVGITRAMQHLVMTYAETRRLYGSETYNKVSRFVREIPPALIQEVRLSNSVSRPFGGTQ
KVNNSSLFSGTGIPETEFTLGQRVQHAVFGEGVILNFEGAGAQARVQVNFAEGSKWLMMG
YAKLVAL
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgatgatctctctctgcttctcaattccctcaacgatgcccagcgtcaggccgta
gccgcctccctgggtcgtcagttggtcctggccggagctggctccggcaaaacccgtgtg
ctggtgcatcgcatcgcctggctgatgcaggtcgagcaagcctccccgcactccgtgctg
tcggtgacgttcaccaacaaggccgctgccgagatgcgtcatcgcatcgagcaactgatg
ggcatcagcccggcaggcatgtgggtcggcacgttccacggcctggcgcaccgcctgttg
cgggcgcactggcaggaagccgggctggtgcagaccttccagatcctggacagcgacgac
cagcagcgcgtggtcaagcgcgtgatccgcgacctgggtctggacgagcaacgctggccg
gcccgtcaggcacagtggttcatcaatgggcagaaggacgaagggctgcgcccgcagcac
attcaggctagcggcgacctgttcctgaccaccatgcgcagcatctatgaagcctacgaa
gcggcctgccagcgggcgggcgtgatcgacttctcggaactgctgctgcgcgccctggac
ctgtggcgtgataacccgggtctgctggcgcactaccagcggcgcttccgccatgtgctg
gtggacgagttccaggacaccaacgccgtgcagtacgcctggttgcgtctgctggcccag
ggcggcgacagtctgatggtggtcggcgacgacgaccagtccatctacggctggcgtggc
gcgaagatcgagaacatccatcagtactcgtccgacttcccggacaccgaggtcatccgt
cttgagcagaactaccgctccacggcgagcatcctcaaagcggccaacggcttgatcgtc
aacaacagcggtcgcctgggcaaagagctgtggaccgatgtcggtgacggcgaactgatc
agcctgtacgcggccttcaacgaacacgatgaagcgcgttacgtagtcgagaccatcgag
agcgtgctcaagaccggtacctcgcgtaacgacatcgccattctgtatcgctccaacgcc
cagtcacgggtgctggaagaagcgctgctgcgcgaacgcattccgtatcgcatctatggc
ggccagcgcttcttcgaacgcgccgagatcaagaacgccatggcgtacctgcgcctgctg
gaaggtcgcggcaacgatgcggcgcttgagcgggtcattaacgtcccggcacgcggcatc
ggtgaaaagactgtcgaagccatccgcgaacacgcccgtcacgccgatgtatcgatgtgg
gaggccatgcgcctgctggtcgccaacaaaggcctgaccggccgcgcggcgacggcgctg
ggcgggttcatcgaactgatcgagaacctgtcggccaaggtcatggagatgccgctgcac
ctgatgacccagacggtcatcgagcaatccgggctgatcacctaccacgagcaggaaaaa
ggcgagaaaggccaggcccgggtagaaaaccttgaggaactggtcagcgctgcgcgtgcc
ttcgaaaataccgaaagcgaagaggacctgaccccgttggcggccttcctcggccatgcg
tcgctggaagcgggcgatactcaggctcaggagcacgaagaaagcattcagttgatgacg
ctgcacagcgccaagggcctggagtttccgcacgtgttcctggtgggcatggaagaaggg
ctgttcccgcacaagatgagcctggaagagcccggccgtcttgaagaggagcgccgtctg
gcgtacgtgggcatcacccgagcgatgcagcatctggtcatgacctacgccgagacgcgt
cgcctgtacggcagcgagacctacaacaaggtgtcgcgtttcgtccgtgagatcccgccg
gcgctgattcaggaagtgcgtctgtccaacagcgtcagccgcccgttcggcggcacccag
aaggtcaacaacagcagcctgttcagcggcaccggcatcccggaaaccgagttcaccctg
ggccagcgtgtgcagcacgcagtattcggtgaaggtgtgatcctcaatttcgagggcgca
ggcgctcaggcccgggtgcaggtcaactttgccgaaggcagcaagtggttgatgatgggt
tacgcgaagctggtggcgttgtaa
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