Pseudomonas asturiensis: N015_01545
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Entry
N015_01545 CDS
T08470
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
KO
K11900
type VI secretion system protein ImpC
Organism
past
Pseudomonas asturiensis
Pathway
past02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
past00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
N015_01545 (tssC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
past02044
]
N015_01545 (tssC)
Secretion system [BR:
past02044
]
Type VI secretion system
Imp/Vas secretion system core components
N015_01545 (tssC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VipB
VipB_2
BMFP
ARM_TBCD_2nd
Motif
Other DBs
NCBI-ProteinID:
QHF01155
UniProt:
A0A1M7QD82
LinkDB
All DBs
Position
complement(347763..349256)
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AA seq
497 aa
AA seq
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MTESSRENQVQQGTTEQTSEFASLLLQEFKPKTERAREAVETAVRTLAEQALAQTDLVSN
DAIKSIESIIAAIDAKLTAQVNQIIHHQDFQQVESAWRGLHYLVNNTESDEQLKIRVLNI
SKPELHKTLKKFKGTAWDQSPIFKKMYEEEYGQFGGEPYGCLVGDYYFDQSPPDVELLGE
LSKVCAAMHAPFIAAASPTVMGMGSWQELSNPRDLTKIFTTPEYAGWRSLRESEDSRYIG
LTMPRFLARLPYGAKTDPVEAFAFEENTDGADSAKYTWANAAYAMAVNINRSFKHYGWCS
RIRGVESGGEVENLPAHTFPTDDGGVDMKCPTEIAISDRREAELAKNGFMPLLHKKNTDF
AAFIGAQSLQKPAEYDDPDATANANLAARLPYLFATCRFAHYLKCIVRDKIGSFKEKDEM
QRWLQDWILNYVDGDPAHSTETTKAQHPLAAAEVVVEDVEGNPGYYNSRFYLRPHYQLEG
LTVSLRLVSKLPSAKGA
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaatcgagtcgcgaaaatcaggtacaacagggcaccactgaacagaccagtgag
ttcgcttcgttgctgctgcaggaattcaaacccaagaccgagcgcgcgcgcgaagcggta
gaaaccgctgtacgcacactggccgaacaggcgctggcgcaaaccgacctggtgtccaac
gatgcgatcaagtcgatcgaatcgatcattgccgccatcgacgccaagctcaccgctcag
gtgaaccagatcatccaccatcaggacttccagcaagtggaaagcgcctggcggggcctg
cactatctggtcaacaacaccgaaagcgacgagcagctgaaaattcgcgtgctgaacatc
tccaagccggagctgcacaagaccctgaagaaattcaagggcacggcgtgggatcagagc
ccgatcttcaagaagatgtacgaagaggaatacggccagttcggcggtgaaccctacggc
tgtctggtgggggattactacttcgatcaatcgccacccgacgtcgagttgctgggcgag
ctgtccaaagtctgcgccgccatgcacgcgccgttcatcgcagcggcctcgccgaccgtg
atgggcatggggtcgtggcaggagctgtccaacccgcgtgacctgaccaagatcttcacc
acaccggagtacgcgggctggcgctcgctgcgtgaatcggaagattcgcgctatatcggc
ctgaccatgccgcgcttcctggcacgtctgccttacggcgccaagaccgatccggtggaa
gccttcgcgttcgaagagaacaccgacggtgccgacagcgccaaatacacctgggccaac
gccgcttacgccatggcggtgaacatcaaccgttcgttcaagcactacggctggtgctcg
cggattcgcggtgtcgaatcgggtggtgaagtcgagaacctgccggctcacacgttcccg
accgacgatggcggcgtggacatgaagtgtccgaccgaaatcgcgatctcggaccgtcgc
gaagccgagttggccaagaacggcttcatgccgctgctgcacaagaagaacactgacttt
gcagcgttcatcggtgcgcaatcgctgcaaaagcctgccgagtatgacgacccggatgcc
acggcgaacgccaatctggcggcccgtctgccatacctgttcgccacctgccgcttcgct
cactacctcaagtgcatcgtgcgcgacaagatcggctcgttcaaagagaaggacgaaatg
cagcgctggctgcaggactggattctcaattacgtcgatggcgacccggcgcactccacc
gaaaccaccaaggcccagcatccactggcagcggcggaagtggtggtcgaggacgttgaa
ggcaacccgggttactacaactcacggttctacctgcgtccgcactatcagctcgaaggc
ctgaccgtatcgctgcgtctggtctccaagctgccgtcggccaagggcgcctga
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