Pseudomonas asturiensis: N015_03080
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Entry
N015_03080 CDS
T08470
Symbol
choX
Name
(GenBank) choline ABC transporter substrate-binding protein
KO
K02002
glycine betaine/proline transport system substrate-binding protein
Organism
past
Pseudomonas asturiensis
Pathway
past02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
past00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
N015_03080 (choX)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
past02000
]
N015_03080 (choX)
Transporters [BR:
past02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
N015_03080 (choX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OpuAC
Motif
Other DBs
NCBI-ProteinID:
QHF01448
LinkDB
All DBs
Position
complement(693716..694663)
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AA seq
315 aa
AA seq
DB search
MKGSKSLLLVATLCVPVLAQAAEPEACHTVNFSDVGWTDITVTTAVTSAVLESLGYKTKT
TMISVPVTYKSLADGKNMDVFLGNWMPTMENDIKAYREAGTVETVRANLENAKYTLAVPE
ALYNKGLKDFADIAKFKKELDGKIYGIEPGNDGNRLIQSMIDKNAFGLKDAGFKVVESSE
AGMLSQVDRAARRNTDVVFLGWEPHPMNTRFKMKYLTGGDDFFGPNYGQATIYTNTRKGY
SQECSNVGQLLKNLSFTLDMESTLMGNVLDDKIKPDAAAKAWIKKNPQVLDTWLAGVTTV
DGKPGLEAARAKLTQ
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggttccaaatcgttgctgttggtcgccacactctgtgttccggtgctggcacag
gccgccgaaccagaagcctgtcataccgtgaacttctccgatgtcggctggaccgacatc
acggtcaccaccgcagtgaccagcgccgtactcgaatcgctcggctacaagaccaagacc
accatgatttccgtaccggtgacctacaagtcgctggccgacggcaagaacatggacgtg
ttcctgggcaactggatgccgaccatggaaaacgacatcaaggcttatcgcgaagctggc
accgtcgagaccgtccgcgccaacctggaaaacgccaagtacacgctggccgtgcctgag
gcgctctacaacaagggtctgaaagactttgccgatatcgccaaattcaaaaaggaactg
gacggcaagatctacggcatcgaaccgggtaacgatggcaaccgcctgatccagagcatg
atcgacaagaatgctttcggcctgaaggacgcaggcttcaaagtagtggagtccagcgaa
gccggcatgctgtcgcaggttgatcgcgcggcacgccgcaacaccgacgtggtgttcctg
ggctgggaaccgcacccgatgaacacccgcttcaagatgaagtacctgaccggtggcgat
gacttcttcggccccaactacggccaggccaccatctacaccaacacccgcaagggctac
agccaggaatgcagcaacgtaggccaattgctcaagaacctctcgttcaccctggacatg
gaaagcacgctgatgggtaacgtgctcgacgacaaaatcaaacctgatgccgctgccaag
gcgtggatcaagaagaaccctcaagtgctcgacacctggctcgccggcgtaaccaccgtt
gacggcaaaccagggctggaggctgccagggccaagctgacccagtaa
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