Pseudomonas asturiensis: N015_04220
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Entry
N015_04220 CDS
T08470
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
past
Pseudomonas asturiensis
Pathway
past03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
past00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
N015_04220 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
past03400
]
N015_04220 (recD)
Enzymes [BR:
past01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
N015_04220 (recD)
DNA repair and recombination proteins [BR:
past03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
N015_04220 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
UvrD_C_2
AAA_11
Helicase_RecD
SH3_13
AAA_22
Viral_helicase1
UvrD-helicase
AAA_16
SLFN-g3_helicase
AAA_17
TraI_hel_assoc_N
T2SSE
AAA_28
PhoH
nSTAND3
NTPase_1
NACHT
AAA_5
Motif
Other DBs
NCBI-ProteinID:
QHF01658
LinkDB
All DBs
Position
975239..977332
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AA seq
697 aa
AA seq
DB search
MSRSFEELLPTALSDISLADLSPLTRVQDLLILLERWVERGWLRALDRAFVAFLSELDPQ
ADPLVLVAAALTSHQLGHGHVCLDLYETLKEPDFALSLPPEGDLQSTPMLLPSQLLAALE
GAAWCQALAGSTLVASAGDTRVEALQKPLVLSDRRLYLRRYWTYERRIAAALRQRLAQDE
APPVDLVQRLDSLFGKANPASDAIIDWQKLACALATRRAFSIITGGPGTGKTTTVVRLLA
LLQAPAVQSGQPLRIRLAAPTGKAAARLTESISQQVQGLDVSAEVRQKIPAEVTTVHRLL
GSRPGTRHFRHHAGNPLPLDVLVVDEASMIDLEMMANLLDALPPHARMVLLGDKDQLASV
EAGAVLGDLCRDAEEGFYSPETQAWLEAVSGEQLDKGGLRQGDAQQHPLAQQVVMLRHSR
RFGQGSGIGQLARLVNQQQDQQARALLAAGSHRDLFALALKGEQDLKFERLVLDGLGQGE
QGPQGYRHYLSVLANERPAQGLSLDDACWTLWARSVLEAFDSFQLLCAVRKGPWGVEGLN
QRITHALFNANLIESEQQWYEGRPVLMTHNDYGLGLMNGDIGITLRLPEREGEDKQVLRV
AFPRNDGSGGVRFVLPSRLNEVETVYAMTVHKSQGSEFAHTALILPEALNPVLTKELIYT
GITRAKHWFSLIEPRQGVFEEALRRKVKRLSGLMLGL
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgctcgttcgaagagctgttgcccaccgcactgagcgacatcagcctcgcagac
ctgagcccgctgacccgcgttcaggatttgctgattctgctggaacgctgggtcgagcgc
ggctggttgcgcgcactggaccgggcctttgtggcgttcctcagtgagctggatccacag
gccgacccgctggtgctggtcgccgctgcgctgaccagccatcaattggggcacggccac
gtatgtctcgacctctacgagacactcaaagagcctgacttcgcgctgtccctgccgccg
gaaggtgatctgcaaagcacgccgatgctcctgccttcgcagttgctggcagcgctggag
ggcgcggcgtggtgtcaggcgctggcgggcagcactctggtggccagcgcaggagacacg
cgcgtcgaagcgctgcaaaaacctttggtgctgtcggaccgccgcctgtatctgcgtcgt
tactggacttacgaacgccggatcgctgcagcattgcgtcagcgtctggcgcaggatgaa
gcaccgccagtggatctggttcaacgtcttgattccttgttcggcaaagccaatcccgcg
tcggacgccattattgactggcagaaactggcctgcgcactggccactcgccgggcgttc
agcatcatcactggcggcccgggaaccggtaaaaccaccacggtggtgcgtctgcttgcg
ctgctgcaagcgcctgccgtgcagagcggccagccgctgcgcattcgtctggccgctccg
accggcaaggcggctgcgcgattgaccgagtccatcagccagcaagtacagggcctggac
gtcagcgctgaggtgcgacagaaaatccccgccgaagtcaccaccgttcaccggttgttg
ggcagtcgtcccggcacgcgacacttccgtcatcatgcaggcaaccccttgccgctggac
gtgctggtggtcgacgaagcatcgatgatcgacctggaaatgatggccaacctgctcgac
gccctgccgccgcatgcgcgcatggtcctgttgggcgacaaggatcaactggcctccgtc
gaggcgggcgcggtgctgggtgacctgtgtcgcgacgccgaagagggtttctacagccct
gaaacccaggcctggctggaagccgtcagcggcgagcaactggacaagggtgggttgcgt
cagggtgatgcgcaacagcacccgctggcgcaacaagtggtgatgctgcgtcattcgcgt
cgattcggacagggcagcggcatcgggcaactggcgcgtctggtcaaccagcaacaggat
cagcaggcgcgggcgttgctggcagccggcagccaccgcgacctcttcgccctggcgctc
aagggtgagcaggacctcaagttcgaacgccttgtactggacggccttggccagggcgag
caggggccgcaaggttatcggcattacctgagcgtgctggcgaatgagcgtccggcacaa
ggcctctcgctggacgacgcgtgctggaccttatgggctcgttctgttctggaagcattc
gactcgtttcaactgctctgcgccgtccgcaaaggcccgtggggcgtggaaggcctcaac
cagcgcatcacccacgcgctgttcaacgccaacctgatcgaaagcgagcagcaatggtac
gaaggccgccccgtgctcatgacgcacaacgattacggcctgggcctgatgaacggcgat
atcggcatcaccctgcgcctgccagagcgtgaaggcgaggacaaacaggtcctgcgcgtc
gcgttcccgcgtaacgacggcagcggcggcgtacgtttcgtcttgcccagccgactcaac
gaggtcgaaaccgtctacgccatgaccgtccacaaatcccaaggctccgaattcgcccac
accgccctgatcctccccgaggccctgaacccggtactgaccaaggagcttatctacacc
ggcatcacccgcgccaagcactggttcagcttgatcgagccacggcagggcgtgttcgaa
gaggccctgcggcgcaaggtgaagcggttgagtgggttgatgttggggctttga
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