Pseudomonas asturiensis: N015_07940
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Entry
N015_07940 CDS
T08470
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
past
Pseudomonas asturiensis
Brite
KEGG Orthology (KO) [BR:
past00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
past03016
]
N015_07940 (rnd)
Enzymes [BR:
past01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
N015_07940 (rnd)
Transfer RNA biogenesis [BR:
past03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
N015_07940 (rnd)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
QHF02346
LinkDB
All DBs
Position
1787065..1788198
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AA seq
377 aa
AA seq
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MAIDIHWIRDDDSLAQHCAQWQSLPFVALDTEFMRVDTFYPIAALLQIGDGSRAWLIDPL
LINDWTPLSALLENPKVIKVVHACSEDLEVLLRLTGSLPVPLFDTQLAAAYLNLGFSMGY
SRLVQEVLNIDLPKGETRSDWLQRPLSETQISYAAEDAVHLAELFGILRPRLSDEKYAWL
LEDGAELVANLRREVDPYEVYRDAKLAWKLSRAQLAVLRGLCAWREVQARARNVPRNRIV
REHSLWPLAKTQPDNLGALARVEDMHPRTVRQDGEFLLELIKTAASTPPEEWPPALPEPL
PIDASGAIKRLRMIGQQYAEQLDMAPELMLRKKTLESLLKSGYPDGPYQLPDSLRGWRRE
LMGQALLDSLATQGEQP
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
gtggccatcgatattcactggattcgcgacgacgacagcctcgcccagcattgcgctcag
tggcagtctctgccgttcgttgcgctcgacaccgagttcatgcgggtcgacactttttac
ccgatcgctgcgttgctgcagatcggcgacggctcacgtgcctggttgattgacccgtta
ttgatcaatgactggacgccgctgtctgcgttgcttgaaaaccccaaggtcatcaaggtc
gtgcatgcgtgcagcgaagaccttgaagtccttctgcgactgaccggcagcctgccggtg
ccgctgttcgacactcagttggccgccgcttacctgaaccttggtttttccatgggctat
tcgcgtctggtgcaggaggtgctcaacatcgacctgcccaaaggcgaaacccgatctgac
tggctgcagcgcccgctgtcggaaacccagatcagctatgccgctgaagatgcagtgcac
ctggctgagctgttcggcattctgcgcccacgtctgtccgatgaaaaatatgcctggttg
ctggaagacggcgctgaactggtcgccaacctgcgccgtgaggtcgacccttacgaggtc
taccgtgacgccaagctggcctggaaactgtcccgtgcacagctcgcggtcttgcgtggg
ctctgcgcatggcgcgaagtgcaggcccgtgcccgcaacgtgccgcgtaaccgcatcgtg
cgtgaacactcgctctggccgttggccaagacccagcctgacaatctcggcgcactggca
cgggtcgaagacatgcacccgcgcacggttcgtcaggacggtgaattcctgttggagctg
atcaagaccgccgccagcacgccgcctgaagagtggccaccagcgttgcccgagccgttg
cccattgatgcctcgggtgccatcaagcgcctgcggatgatcggtcagcagtacgccgag
caactggacatggcaccggagctgatgcttcgcaagaagactctcgaatccctgctcaag
agcggttatcccgacggtccctatcaactgcccgattcgctgcgtggctggcgtcgcgaa
ttgatgggccaggcgttgctagacagtctggcgactcagggagaacagccttga
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