Pseudomonas asturiensis: N015_10460
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Entry
N015_10460 CDS
T08470
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
past
Pseudomonas asturiensis
Brite
KEGG Orthology (KO) [BR:
past00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
past03016
]
N015_10460
Enzymes [BR:
past01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
N015_10460
Transfer RNA biogenesis [BR:
past03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
N015_10460
Prokaryotic type
tRNA splicing ligases
N015_10460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
QHF02808
UniProt:
A0ABX6HBQ3
LinkDB
All DBs
Position
2332975..2334201
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AA seq
408 aa
AA seq
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MEKTTYQLLEVANGKPIKMWTQGVPVESEARQQLMNTASMPFIFKHLAVMPDVHLGKGST
IGSVIPTVGAIIPAAVGVDIGCGMIAARTSLTANDLPDNLFGLRSAIEQAVPHGRTSTRG
GRDKGAWGDIPQQADQVWEALAPGFKALTDKYPQLAKSNNRQHLGTLGSGNHFIEVCLDE
ADRVWFMLHSGSRGVGNAIGTLFIQMAQADMRQHIANLPDRDLAYFEEGSQHFDDYVQAV
GWAQDFARQNRELMMQAVIQATRKIISKPFEVALEAVNCHHNYVQKERHFGEDVLVTRKG
AVSARKGELGIIPGSMGAKSFIVRGLGNEESFCSCSHGAGRTMSRTKAKSTFTVEDQILA
TAHVECRKDAAVIDEIPMAYKDIDKVMHAQRELVEVMHTLRQVVCVKG
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagaccacttaccaattgctggaagtcgcaaacggcaagcctatcaagatgtgg
acccaaggcgttcctgtggaaagcgaggcgcgtcagcagctgatgaatacggccagcatg
ccattcatcttcaagcacctggcagtcatgcctgatgtccatctgggcaagggatcgacc
attggcagcgtgatccccaccgtgggggcaatcattccggctgcggtcggggtggatatc
ggttgcgggatgatcgctgcgcgcacgtcactcacggcaaacgacctgccggacaacctg
ttcggtcttcgtagcgcgatcgagcaggctgtgcctcatggccggacctcgacacgtggc
ggtcgggacaagggcgcgtggggcgatattccacagcaggccgatcaggtgtgggaggcg
ttggcgccaggcttcaaggcgctgacggacaagtacccgcagctggccaaaagcaacaac
cgtcagcatctgggtacgctgggctcgggcaaccatttcatcgaggtctgcctggatgaa
gccgaccgggtctggttcatgttgcacagcggctcgcggggcgtgggcaatgcgatcggt
acgctgttcatccagatggcacaggccgatatgcgtcagcacatcgccaaccttccggac
cgcgacctggcgtacttcgaagagggcagtcaacacttcgatgattacgtgcaggcggtc
ggctgggctcaggatttcgcccggcagaaccgcgaattgatgatgcaggcagtgattcag
gccacccgcaagatcatcagcaagccctttgaggtggcgctggaagcggtgaactgtcac
cacaactacgtgcagaaagagcggcatttcggcgaagacgtgctggtcacccgcaaaggt
gcagtgtcggccaggaagggtgagctggggattattccgggttccatgggcgcgaaaagc
ttcatcgtgcgcggactgggcaacgaggaatcattttgctcctgcagccacggtgccggt
cgcaccatgagccggaccaaagccaagagcacgttcacggtcgaggaccagatccttgcc
acagcgcacgtggagtgccgcaaggatgctgccgtcattgatgaaatcccgatggcctat
aaggacatcgacaaggtcatgcatgcgcagcgtgaactggtggaagtgatgcacaccctg
cggcaggtggtgtgtgtgaaaggttaa
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