Pseudomonas asturiensis: N015_13445
Help
Entry
N015_13445 CDS
T08470
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
past
Pseudomonas asturiensis
Brite
KEGG Orthology (KO) [BR:
past00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
past03032
]
N015_13445
03400 DNA repair and recombination proteins [BR:
past03400
]
N015_13445
Enzymes [BR:
past01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
N015_13445
DNA replication proteins [BR:
past03032
]
Prokaryotic type
DNA Topoisomerases
N015_13445
DNA repair and recombination proteins [BR:
past03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
N015_13445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QHF03358
LinkDB
All DBs
Position
complement(2959138..2960193)
Genome browser
AA seq
351 aa
AA seq
DB search
MPDSTVISPLASDLHYVDDTQPGFTRKVLRGKFAYFDTQGERIKDESEIKRINALAVPPA
YTDVWICADPNGHLQATGRDARGRKQYRYHPRWREIRDQDKYSRMIDFGHALPKVRKQIE
AQLAQPGMGREKVMATVVSLLDATLIRIGNSRYAKENRSYGLTTLRNKHVEVKGGQILFE
FRGKSGVEHSVTVKDRRLANVIKRCMELPGQNLFQYLDDEGVRHNVTSSDINAYLHSLTG
SDFTAKDYRTWAASALALATLQKLHWEPEADAKRHIVEMVKAVSRQLGNTPAICRKCYIH
PAVLEGFLLGNLAALPRSRQRKGLRLEEVALASYLRTLADRVEAAAVKSKP
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgcctgactcgacggttatcagccccctcgccagcgacctgcattacgtagacgacacc
cagccagggttcacacgcaaggtcctgcgtggcaagttcgcttatttcgacacccagggt
gaacgcatcaaggacgagtcggaaatcaagcgcatcaacgcgctggccgtaccgcccgcc
tacaccgacgtctggatctgcgccgaccccaatggccacctgcaggccaccggccgtgac
gcacgcggtcgcaagcagtatcgctaccatccgcgctggcgcgagatacgcgaccaggat
aaatactcacgcatgattgacttcgggcacgcgctccccaaggtgcgcaagcagatagaa
gcgcaactcgctcagcctggcatgggccgtgaaaaagtcatggcaacagtggtgtctctg
ctcgatgcaacactgatccgcattggtaacagccggtatgccaaggaaaatcgctcttac
ggcctgaccaccctgcgtaacaagcacgtcgaagtcaaaggcggacagattctgttcgag
tttcgcggcaaaagcggtgtcgagcacagtgttacagtaaaggaccgacgcctggccaac
gtcatcaaacgctgcatggagctgcctggtcagaacctgtttcagtatctggacgatgaa
ggcgtacgccataacgtgacatcttcggacatcaacgcctatctgcacagcctcaccggc
tcggacttcaccgccaaggactaccggacctgggccgccagcgcactggcattagccacc
ttgcagaaacttcactgggaacccgaggcagatgccaaaaggcatatcgtcgagatggtc
aaggcggtatccaggcagttgggcaatacgccagccatctgccgcaagtgctacatacac
cccgccgtgctggaaggctttctgctgggcaatctggccgctctgccacgctccagacag
cgcaagggcctgcggcttgaagaagttgctttggccagctacctgcgcaccctggcagac
cgcgtcgaggccgctgcggtcaaaagcaagccttga
DBGET
integrated database retrieval system
