Pseudomonas asturiensis: N015_15220
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Entry
N015_15220 CDS
T08470
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
KO
K11907
type VI secretion system protein VasG
Organism
past
Pseudomonas asturiensis
Pathway
past02025
Biofilm formation - Pseudomonas aeruginosa
past03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
past00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
N015_15220 (tssH)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
N015_15220 (tssH)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
past02044
]
N015_15220 (tssH)
Secretion system [BR:
past02044
]
Type VI secretion system
Imp/Vas secretion system core components
N015_15220 (tssH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
AAA_5
AAA_16
ClpB_D2-small
AAA_22
nSTAND3
NACHT
AAA_7
Sigma54_activat
IstB_IS21
Clp_N
AAA_25
AAA_24
Bacillus_HBL
IPT
Hpr_kinase_C
Motif
Other DBs
NCBI-ProteinID:
QHF03688
UniProt:
A0AA92F9A7
LinkDB
All DBs
Position
complement(3402757..3405375)
Genome browser
AA seq
872 aa
AA seq
DB search
MINVDLQQLVNALDAHTRQDLESCAGRCVARGGSKILVEDLLLALLERPESLLARALLDA
GAESAHLAATLQPAIEHSASSNPVFATELIQWLQDALLVANLELRQNHIEQAALILALLR
NPMRYAGARYHRLLSMINADRLRDFALDDQAGPDVRPLKDIGESWLKRFTHNLTQQAREG
RLDPVLCRDEAIRQMVDILARRRKNNPIVVGEAGVGKTAIVEGLALRIIEGEVPESLKDV
ELLTLDMGLLQAGASIKGEFERRLNGVIEEVKASAQSIILFIDEAHTLIGAGGQAGGSDA
ANLLKPALARGELRTIAATTWAEYKKYFEKDPALARRFQPVRVLEPTVAEAITILRGLAP
VYEKSHGVYLRDDAVVAAAQLSARYLTGRQLPDKAVDLLDTACARVRISLAAAPERLERL
RTTFAEQRRQLDAMQRDARAGLVVDGQGLIALEDGLQALQRQIGTLESAWQQQRAGVERL
LSLRRQLTDLQTQHNGDAATGSQSLQSEGQAIESLEGELQQAHCELSESQAADRLVSFEV
CPRLIAEVVSAWTGIPLSQLAQEYSSKVASFAADLKTRIRGQDQAVHVLDRAMRAAAAGL
NKPDAPVGVYLLVGPSGVGKTETAIALADLLYGGERFLTTINMSEFQEKHTVSRLIGAPP
GYVGYGEGGLLTEAVRQKPYSVILLDEVEKADPDVMNLFYQIFDKGIANDGEGREIDFRN
TLILMTSNLGSERIAALCQSDPQPDVEQLETDIRPLLIAHFKPALLARMNVVPYYPMTRD
VLRELVELKLLRLGARLKDRGLVFGYSRRLVTFLLDRCEQGDTGARRVDQLLDACVTPLI
ADRLLVAMSEGKDIHRIHATLDEAGLVVCEFE
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgatcaacgtagatctgcaacaactggtcaacgcactggatgcgcacactcggcaagat
ctggagagttgcgcggggcgatgtgtagccagaggcggcagcaaaattcttgtggaggac
ctgttactggccctgctggagcgtcctgaaagtcttctcgcgcgtgcgctgctggacgca
ggtgccgagtccgcgcacctggctgctacgctgcagcccgcgatcgaacacagtgcatcc
agcaatccggtgtttgcgacagagctgattcagtggcttcaagacgcactgctggtggcc
aatctggaactgcgccagaaccacatcgaacaggcagcgctcattctggcgttgttgcgc
aatccgatgcggtacgcaggcgctcgctatcaccggctgttgagcatgatcaatgccgat
cgtttgcgcgatttcgcactggacgatcaggcgggtccagatgttcggccattgaaagac
ataggcgagtcctggctcaaacgcttcactcataacctgactcaacaggcacgcgaaggt
cggctcgaccctgtgctgtgtcgtgacgaagccatacgccagatggtcgacatccttgcc
cggcggcgtaagaacaatccgattgtggtcggtgaggccggcgtcggcaagaccgcgatc
gtcgaaggactggccctgagaatcatcgaaggggaggtgcctgagtccctcaaagacgtc
gagctgctgaccctggacatgggtctgctgcaggcaggtgccagcatcaagggcgagttc
gagcgtcgtctgaacggcgtgatcgaagaggtcaaagcgtcagcgcagagcatcatcctg
tttatcgacgaagcgcataccctgataggcgcgggagggcaggcgggtggctcggatgct
gcgaatctgctcaagccggccctggcgcgcggagagctgcgcacaatcgctgcgaccact
tgggcagagtacaaaaagtactttgaaaaggatcctgcgctggcacgtcgcttccagccg
gttcgggtgcttgagcccacagtcgcagaggccatcaccattctgcgtggcctggcgccg
gtctacgagaaaagccacggggtttatctgcgcgatgatgccgtggttgccgcagcgcag
ctatcggctcgctacctgacgggacggcagttgccggacaaggcggtcgatcttctcgat
accgcgtgcgcgcgggttcgaatcagccttgccgccgcccccgagcgactggagcgcctg
cgaaccacgtttgccgagcagcgacgccagctcgatgccatgcaacgtgatgcgcgtgcc
gggcttgtcgttgacgggcagggcctgatcgcgctggaggacggccttcaagcacttcag
cggcagatcggcacccttgagtctgcatggcaacaacaacgtgctggcgtcgagcgcttg
ctttcgctgcgtcggcagttgactgacttgcagacgcagcacaatggcgacgctgcaacc
ggctcgcagtcattgcagagtgaaggccaggcgattgagtcgcttgaaggcgagttgcaa
caggctcattgcgaactgagcgaaagccaggccgccgatcgtctggtcagttttgaagtg
tgtcccagattgattgctgaggtggtcagtgcctggacgggcattcctctgtcacagctt
gcgcaggaatacagttcgaaagtcgccagctttgcggccgatctgaaaacgcgcatccgg
ggtcaggaccaggcagtgcatgtgctagatcgggccatgcgtgcggctgcggccggtttg
aacaagccggacgcaccggttggcgtttatctcctggtggggcccagcggggtaggcaag
actgaaacggctatcgcactggcggatctgctttatggcggcgagcgtttcctgacgacc
atcaacatgtccgaatttcaggaaaaacatacggtgtcgcgtttgatcggcgcacccccg
ggttatgtgggctatggggaaggggggctgctgaccgaggccgtccggcaaaagccctat
tcagtgattctgctggatgaggtggagaaggccgaccctgatgtcatgaacctgttttat
cagatctttgacaaaggcattgccaatgatggggagggccgggagatcgactttcgcaat
accttgatcctgatgacgtccaacctgggaagcgagcgcattgcagcgttgtgtcagtca
gatccacagcctgatgtcgagcaactggagaccgacatacggccgctgctgatcgcacat
ttcaagcccgcgttgctggcccgaatgaacgtggtgccctactacccaatgacaagagac
gtgctgcgtgaactggttgaactcaagctgctgcgactgggcgcccgcctgaaagacaga
gggctggtcttcggctattccaggcgtctggtcacgttcctgctggatcgctgcgagcaa
ggtgacaccggcgcgcgacgtgtcgaccaattgctggacgcgtgtgtcacgcctctgatc
gccgatcgattactcgtcgccatgtccgagggtaaagacatccaccggattcacgcgacc
cttgacgaagcgggtcttgttgtctgtgagttcgaatag
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