Pseudomonas asturiensis: N015_17970
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Entry
N015_17970 CDS
T08470
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
past
Pseudomonas asturiensis
Pathway
past02020
Two-component system
past02025
Biofilm formation - Pseudomonas aeruginosa
past02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
past00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
N015_17970
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
N015_17970
09142 Cell motility
02040 Flagellar assembly
N015_17970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
past03021
]
N015_17970
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
past02035
]
N015_17970
Transcription machinery [BR:
past03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
N015_17970
Bacterial motility proteins [BR:
past02035
]
Flagellar system
Flagellar assembly proteins
Stator
N015_17970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_30
UPF0122
MarR_2
GerE
Rv2175c_wHTH
Phage_terminase
Motif
Other DBs
NCBI-ProteinID:
QHF04191
UniProt:
A0A1M7NAQ6
LinkDB
All DBs
Position
complement(4051081..4051821)
Genome browser
AA seq
246 aa
AA seq
DB search
MTASGYQMYSKASRNSQYELIERYAPLVKRIAYHLLARLPASVQVEDLIQAGMIGLLEVS
TKYDSTKGASFETYAGIRIRGAMLDEVRKGDWAPRSVHRNTRMVSDAIRAIEAKTGRDAK
DHEVAAELQLSLDDYYGILNDTLGSRLFSFDDLLQDGDHEGLHEDGASGSLEPSRDLEDE
RFQAALADAIANLPERERLVLALYYDEELNLKEIGEVLGVSESRVSQLHSQCAARLRGRL
GEWRAR
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgactgcgagcggctaccagatgtacagcaaggcttcgcgtaactcccagtacgagttg
atcgagcgttacgccccgttggtcaagcgcattgcctaccacttgctggcgcgcttgcct
gccagcgtgcaggtcgaggacctgatccaggctggcatgatcggcctgttggaagtgtcg
accaaatacgactccaccaagggggcgagcttcgagacttacgcaggcatccgcattcgt
ggtgcaatgctcgatgaagttcgcaagggtgactgggcgccacgctcggtccaccgcaat
acccgtatggtgagcgacgcaattcgcgcaattgaagcgaaaaccgggcgtgacgctaaa
gatcacgaggttgcggccgaactccagttaagtctcgatgattattacgggattttgaat
gataccttgggcagccgcctcttcagtttcgacgacctgcttcaggacggcgatcatgaa
gggctgcatgaggatggtgccagcggttcgctcgaaccgtcacgggacctggaagacgag
cgcttccaggccgccctggccgatgcgattgccaatctgccggagcgtgagcgtctggtc
ttggcgctgtactacgacgaagagctgaacctcaaggaaatcggagaggtcctgggggtc
agtgaatcgcgggtcagtcagttacacagccagtgcgcagctcgtttgcgagggcgtttg
ggggagtggcgagcgcgttga
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integrated database retrieval system
