Pseudomonas asturiensis: N015_19915
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Entry
N015_19915 CDS
T08470
Name
(GenBank) DEAD/DEAH box helicase
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
past
Pseudomonas asturiensis
Brite
KEGG Orthology (KO) [BR:
past00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
past03009
]
N015_19915
Enzymes [BR:
past01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
N015_19915
Ribosome biogenesis [BR:
past03009
]
Prokaryotic type
rRNA helicases
N015_19915
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QHF04548
LinkDB
All DBs
Position
complement(4472225..4473562)
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AA seq
445 aa
AA seq
DB search
MFSEFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILN
RLIGPAKVRVDIRAVILLPTRELAQQTLKEVERFSQFTFVKAGLVTGGEDFKAQAAMLRK
VPDILIGTPGRLLEQLNAGNLDLKHVEVLVLDEADRMLDMGFSEDVERLAGECASREQTM
LFSATTGGAGLREMIGKVLKDPQHLQLNNVSELASGTRHQIITADHNVHKEQVLNWLLTN
ETYQKAIIFTNTKAMADRLYGRLVALEYKAFVLHGDKDQKDRKAAIDRLKQGGAKIMVAT
DVAARGLDVEGLDMVINFDMPRSGDDYVHRVGRTGRAGSDGLAISLICHGDWNLMSSIER
YLKQSFERRVIKEVKGTYGGPKKVKASGKAVGVKKKKTDAKGDKKKVAAKGPTKRKTANR
PKSDLVSQDGMAPLKKRSTPAPAAE
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
gtgttttccgaattcgccctgcacgaacgcctgcttaaagctgtggccgagcttaaattt
gtcgagcctacgcccgtgcaggcagcggccattccgctggcattgcaagggcgcgacctg
cgggtgactgcgcagaccggtagcggcaagacagccgctttcgtactgccgatcctcaat
cgcctgatcggcccggccaaggttcgcgtggacatccgcgccgtgatcctgctgccgacc
cgcgagctggctcagcagaccctgaaagaagtcgagcgcttttcgcagttcaccttcgtc
aaggcaggcctggtcaccggcggtgaagacttcaaggctcaggccgccatgctgcgcaag
gtgccggacatcctgatcggcacgccgggtcgcctgctcgaacaactcaacgcgggcaat
ctggacctcaagcacgttgaagtgctggtactggacgaagccgaccgcatgctggacatg
ggcttctccgaagacgtcgagcgtctggcgggtgaatgcgccagtcgcgagcagaccatg
ctgttctccgccaccaccggcggtgcgggcctgcgtgaaatgatcggcaaggtcctgaag
gatccccagcacctgcagctcaacaacgtcagtgagctggcttccggcacgcgccaccag
atcatcaccgctgaccataatgtgcacaaagagcaggtcctgaactggttgctgaccaac
gagacctaccagaaagccattatcttcaccaacaccaaggccatggccgaccgtctgtat
ggccgtctggttgcgctggaatacaaggcgttcgtgctgcacggtgacaaggaccagaaa
gaccgcaaggcagccatcgaccgtttgaagcagggcggtgccaagatcatggtcgccact
gacgtggcagcccgtggtctggacgttgaaggcctggacatggtcatcaacttcgacatg
ccgcgcagcggcgatgactacgtgcaccgtgtgggccgtaccggtcgtgccggcagcgat
ggcctggcgatctcgctgatctgccatggcgactggaacctgatgtccagcatcgagcgc
tacctcaagcagagcttcgagcgccgcgtcatcaaggaagtcaaaggcacttacggcggg
ccgaagaaggtcaaggcgtcgggcaaggccgttggcgtgaagaagaaaaagaccgacgcc
aagggcgacaagaaaaaagtcgccgccaaaggccctaccaagcgcaagaccgccaaccgt
cccaagtccgatctggtcagccaggacggtatggcacctctgaaaaaacgcagcaccccg
gcacctgcggctgagtga
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