Pseudomonas asturiensis: N015_20115
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Entry
N015_20115 CDS
T08470
Name
(GenBank) mannuronan epimerase
Organism
past
Pseudomonas asturiensis
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HemolysinCabind
Peptidase_M10_C
Pect-lyase_RHGA_epim
He_PIG
Beta_helix
NosD
End_N_terminal
Motif
Other DBs
NCBI-ProteinID:
QHF04582
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All DBs
Position
4513773..4518605
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AA seq
1610 aa
AA seq
DB search
MIFNAKDYGALGDGITDDTAALQAAIDAAAAAGGGEVVMAAGTYIVSGGEEPSDGCLMLK
SNVTLSGAGMGETTLKLADGSDTKITGIVRSAYGEETHDFGMNNLTLDGNRDATTGKVDG
WFNGYIPGSTGKDSNVTLDRVEIKDCSGYGFDPHEQTVNMVIKNSVSHGNGLDGFVADYL
SDSVFENNVAFNNDRHGFNVVTSTHDFTLSNNVSYGNGSTGIVVQRGSENIASPANITIT
GGAVYDNGAEGVLIKLSSQVSVSGVNIHDNASAGVRIYGSSGVDIVDNTLTNNALGAAVP
EIIIQSYDDRSGVSGKYFNGSDNLIRGNLITGSDQSTYGVAERNEDGTDRNSVVGNTISH
TSKGLTLIYGDGSFAGDDFPLVTVQGTAANDTLNGGAANELIFGMDGKDTLNGGAGDDIL
VGGAGADKLSGGAGADTFRFDSPTDSYRTASSSSVDLLTDFDVSQDRIDLANLGFSGLGS
GKNGTLNISYNASTDRTYIKSLEADANGNRFELGLSGNLKDTLNASHFLFQRVIEGTSGG
DTLTGTGGNDVINGNAGADRIDGGAGADTITGGADADTLTGGAGADVFVYTSRLDSYRNY
NASSPKQSDTLTDFNVTEDRIDLSGIGVRGLGDGSGQTVYLSLNGDSTKTYIKTGAVDTT
GNRFEIALQGNLLDKLSASNFIFSTLSSANQAPTLNTPLMDQSVSEREAFSYAVQPGSFS
DPDSDTLTYSATLADNSALPDWLKFDSKTLTFSGTPGGTAAGLYSVLLTASDATGASVTD
SFAINVGNVTPGILTGTDNAESLYGTEGNDTILGLGGDDTLHGDTGADVINGGLGRDALY
GGDGDDTFIYSTLADSSRDYDAGGLTATDTIYDFTPGQDRIDVSALGFLGLGNGENHTLY
MTLNETGDKTYIKSATPDADGNRFEIALTGNLLDTLTDADFVLGQRAPQEILYLPTLGQS
NARLLRMTEDDNQSGTSEMVKDLTKYTDYDVRSQFTDANGDGIDLAVGGSTVVGYSTRSL
DEQRVSWWLTDTDQPGPALLRATELLKTQLASLNAIDKVTTGIIWGQGEEAAQEIARATD
KQAAADLYKASTLKVFDYLHAQIGDFTVYLIETGHYQTDAAKARGYTDEKIEAIVEGAGY
VRSAQEAIASERTDVKLAVDYTDLPLRYEVNPLVYPDDVWHLHEESAEIVGQRLADFIAD
DKGFRGDASDNNDPADIADGGQNEGGNIFGTADDDTLVGGTGNDRLDGDQGVDDMTGGDG
NDIYVVDNALDTVTESNDSPSQIDTVLASVTWTLGANTENLMLTGISAINGTGNALKNVI
TGNASNNVLDGGAGVDLLTGGDGSDSYYVDDAADRVVETNADARTGGTDTVYSALSSYAL
GAHLENLVMTGSGAANAIGNTLDNVLYASAGDNVLDGRDGNDTVSYQFASAGVTVALNTS
AQQATGGSGLDTLKFTENLTGSQFADALTGNKNANDLQGGDGNDTLSGGAGDDVLTGGSG
ADTLIGGTGADRYVFTATAEMGLGDLRDIIKGFKAAEGDTLDFSAIDARPSTDATDAFVF
IGNAAFSANNTGELRFADGVLYGNIDDDIDADFEIQLTGVQGLQASDIIV
NT seq
4833 nt
NT seq
+upstream
nt +downstream
nt
atgatattcaatgcaaaagactatggagctttgggcgacggcatcacggacgatacagca
gcacttcaggccgctatcgatgcggcagcggcagccggcggcggcgaggtggtgatggcc
gccgggacgtatatcgtctcgggtggcgaggaaccttccgatggttgcctgatgctgaaa
agcaacgtcaccttgtctggcgcaggcatgggcgagaccaccctcaaactggcggacggc
tccgataccaagatcacggggatcgtccgttcggcctatggcgaggaaacccacgacttt
ggcatgaacaacctgaccctggatggcaaccgtgacgccaccaccggcaaggtggatggc
tggttcaacggctacattccgggatcgaccggcaaggactccaacgtcacgctcgaccgt
gtcgagatcaaggattgctcgggatacggtttcgatccgcacgagcagaccgtgaacatg
gtgatcaagaacagcgtgtcccacggtaacggcctggacggtttcgtcgccgactatctg
agcgacagcgtgttcgaaaacaacgtggcgtttaacaacgaccggcacggtttcaacgtg
gtgaccagcacccacgacttcaccctgagcaacaacgtgtcgtacggcaacggcagcacc
ggcatcgtcgtgcagcgtggcagcgagaacattgcgtcgcccgccaacatcaccatcact
ggcggcgcggtctacgacaacggagccgaaggcgtactgatcaagctgtccagccaggtc
tcggtcagcggcgtaaacatccacgacaacgccagcgcgggcgtgcgcatctatggcagt
tccggggtggacatcgtcgacaacaccttgaccaacaacgccctcggcgcggcagtgccg
gagatcatcatccagtcctacgacgacaggtcgggcgtatccggcaagtacttcaacggc
agcgacaacctgatccgtggcaacctgatcaccggcagcgatcagtccacctatggcgtt
gccgaacgcaatgaagacggcacggaccgtaacagcgtggtgggcaatacgatcagccac
accagcaaaggcctgacgctgatctatggcgatggcagcttcgcgggcgatgatttccca
ctggtcaccgtacaaggcacagcggccaacgacaccctcaatggcggcgcggcaaacgaa
ctgatcttcggcatggacggcaaggataccctcaacggcggcgcgggcgatgacatcctc
gtcggcggggccggggccgacaaactcagcggtggcgcgggcgcggacaccttccgcttc
gattcaccgaccgacagctatcgcaccgccagcagcagttcggtcgatctgctgaccgat
ttcgacgtcagtcaggaccgtatcgacctggcgaacctgggcttcagcggcctgggcagc
ggcaagaacggaacactgaacatcagctacaacgcctccacggatcgcacctacatcaag
tcactcgaagccgacgccaatggcaaccggttcgaactcggtctgagcggcaacctgaag
gacacgctgaacgccagccacttcctcttccagcgcgtgatcgaggggacgtcaggtggc
gatacgttgaccggcaccggcggcaacgatgtgatcaacggcaatgcgggcgcggaccgt
atcgatggcggcgccggagccgacacgatcacgggcggagccgatgccgacacactgacc
ggtggagccggggctgatgtattcgtctacacctcgcgactggacagctaccgcaattac
aacgccagcagtcccaaacagagcgacaccctcacggacttcaacgtgaccgaagaccgc
atcgacctctctggcatcggcgtgcgcgggctgggcgatggcagtgggcagactgtctac
ctgtctttgaacggtgacagcaccaagacctacatcaagaccggggcagtcgataccacc
ggcaatcgcttcgagatcgccctgcaaggcaatctgctcgacaagttgagcgcttccaac
ttcatcttttccaccctttcctcggccaatcaggccccgacgctcaacacgccattgatg
gaccagagcgtcagcgaacgggaggcgttttcctatgcggtgcagccgggcagtttcagc
gacccggacagcgacacgctgacctatagcgctaccctggccgacaacagcgccctgccc
gactggctgaagttcgacagcaagacgctgaccttcagcggcacaccgggcggaacggca
gcgggcctttactcggtattactgactgccagcgacgcgaccggcgcatccgtgaccgac
agcttcgccattaacgtgggcaacgtcaccccggggatcctgaccggcaccgacaacgct
gagtcgctgtacggcaccgaaggtaatgacacaatcctggggctgggcggtgacgacaca
ctgcacggcgacacgggtgccgacgtcatcaatggcggactgggtcgcgatgcgctgtac
ggcggtgatggcgacgacacgttcatctacagcaccctcgccgacagttcccgcgactat
gacgcaggcggcttgacggccaccgacacgatctacgacttcacacccggccaggacagg
atcgacgtctccgcactgggctttctgggcctgggcaacggtgaaaaccacacgctgtac
atgacgctcaacgaaacaggtgacaaaacctacatcaagtccgccacgcctgacgccgac
ggcaaccgcttcgaaatcgcgctgaccggcaatctgctcgataccctgacagacgcagac
tttgtattgggtcagcgcgctccacaggagattctctacctgccgacgctgggccaatcc
aacgcccggctgctgcgcatgaccgaagacgacaaccagtccgggacctcggagatggtc
aaggacctgaccaagtacaccgattacgacgtgcgcagccagttcaccgatgccaacggt
gatggcattgacctggccgtagggggcagcacggtggtgggttattcgacccgcagcctc
gacgaacagcgagtgtcatggtggctgaccgacaccgaccagccgggtccggcattgctg
cgcgccaccgagttgctcaagacgcaactggcgtcgttgaacgccatcgacaaggtgacc
acgggcattatctggggtcagggcgaggaagccgcgcaggagattgcccgcgccactgat
aaacaggccgccgctgatctctacaaggcctcgaccctgaaagtattcgattacctgcac
gcgcagatcggcgacttcacggtgtacctgatagaaaccggtcactaccagaccgacgct
gccaaggcgcgcggctacaccgatgaaaagatcgaggccatcgttgaaggtgccggttat
gtccgaagcgcccaggaagccatcgccagcgagcgcaccgacgtcaagctggccgtggac
tacaccgacctgcccttgcgttatgaagtcaatccactggtctatcccgacgacgtctgg
cacctgcatgaagaatccgcagagatcgtgggccaacgactggccgacttcatcgccgac
gacaagggtttcagaggcgatgccagcgataacaacgacccggccgatatcgccgacggt
ggccagaacgagggtggcaacatctttggcaccgccgatgacgacacgctggtgggcggg
accggcaatgaccggcttgatggcgatcagggcgtggatgacatgacgggcggcgacggc
aacgacatttacgtggtcgacaatgcgctggacaccgtgaccgagagcaacgactcgccg
tcgcaaatcgacaccgtgctggcatcggtgacctggacgctgggagcgaacacagagaac
ctgatgctcaccggcatttcggccatcaacggcaccggcaacgcgctaaagaacgtgatc
accggcaatgcctccaataacgtactggacggcggcgctggcgttgacttgctcaccggc
ggcgacggatcagacagctattacgtggacgacgccgccgatcgcgtggtcgagaccaat
gccgatgcgcgcaccggtggcacggacacggtgtacagcgccttgtcgagctacgccctg
ggcgcgcatctggaaaaccttgtgatgaccggcagcggcgcggccaacgccatcggcaac
acgctggataacgtgctgtatgccagcgctggcgacaacgtgctcgatggccgcgatggc
aacgacacggtgtcctatcagtttgccagcgcgggagtcacagtggcgttgaacaccagc
gcacagcaagccactggcgggtcagggctggacaccctcaagttcacggaaaacctgaca
ggcagccagtttgccgatgcgctgaccggcaacaagaacgccaatgacctgcaaggcggt
gatggcaacgacaccttgtccggtggcgcaggtgacgatgtgctgacagggggttcaggc
gcagacacactgatcgggggcacgggtgccgaccgctacgtattcaccgcgaccgccgag
atggggctgggcgacctgcgtgacatcatcaagggcttcaaggccgccgagggcgacacc
ctggacttctccgccattgacgctcgcccatcgaccgatgcaacggatgctttcgtattt
atcggcaacgcggcgttcagcgccaacaacaccggcgagcttcgtttcgccgatggcgtg
ctgtacggcaacatcgacgacgatatcgacgcagacttcgaaatccagctgactggggtt
caaggccttcaggcgtcggacatcatcgtctga
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integrated database retrieval system
