Pseudomonas asturiensis: N015_20200
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Entry
N015_20200 CDS
T08470
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
past
Pseudomonas asturiensis
Brite
KEGG Orthology (KO) [BR:
past00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
past03021
]
N015_20200 (rapA)
Transcription machinery [BR:
past03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
N015_20200 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QHF04598
LinkDB
All DBs
Position
4540982..4543828
Genome browser
AA seq
948 aa
AA seq
DB search
MAQQYQPGQRWISDSEAELGLGTVLAQDGRLLTVLYPATGDTRQYALRNAPLTRVRFSPG
DVITHFENWKMTVREVDDVDGLMVYHGLNAQNEVVTLPETQLSNFIQFRLATDRLFAGQI
DQLSWFSLRYNTLEHTSRQLQSSLWGLGGVRAQPIAHQLHIAREVADRIAPRVLLADEVG
LGKTIEAGLVIHRQLLSGRASRVLILVPENLQHQWLVEMRRRFNLQVALFDAERFMESDA
GNPFEDTQLALVALEWLVSDEKAQDALFAAGWDLMVVDEAHHLVWHEDKASAEYSLVEQL
AEVIPGVLLLTATPEQLGQDSHFARLRLLDPNRFHDLKAFRAESDNYRPVAQAVQELLDK
GVLSAEAQKTIHGFLGAEGDTLLAAVNAGDDEAKARLIRELLDRHGTGRVLFRNTRAAVQ
GFPERKLHAYPLPCPAEYLELPLGEHPDLYPEVSFQAHSEVSEEERWWRFDPRVDWLIDT
LKMLKRVKVLVICAHAETAMDLEDALRVRSGIPATVFHEGMNILERDRAAAYFADEEFGA
QVLICSEIGSEGRNFQFSHHLVLFDLPSHPDLLEQRIGRLDRIGQKHIIELHVPFLETSP
QARLFQWYHEALNAFLNTCPTGNALQHQFGPRLLPLLESGDDDEWQSLIDEARAERERLE
SELHTGRDRLLELNSGGAGEGEALVEDILEQDDQFSLPIYMETLFDAFGIDSEDHSENAL
ILKPSEKMLDASFPLGDDEGVTITYDRNQALSREDMQFITWEHPMVQGGMDLVLSGSMGN
TAVALIKNKALKPGTVLLELIYVSEVVAPRSLQLGRYLPPAALRCLLDANGNDLSSRVSF
NTLNDQLESVPRASANKFIQAQRDVLTPRINAGEEKITPKHAERVAEAQRRLAADTEEEL
ARLTALQAVNPTVRDSELVALRTQREQGLAMLEKAALRLEAIRVLVAG
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcagtatcaaccggggcaacgctggattagcgacagcgaagccgagctgggt
ttaggcaccgttctggcacaggacggccgcttattgaccgtgctctacccggccactggc
gacacgcgccagtacgcactgcgtaatgcaccgctcacccgcgtgcgtttctctccgggc
gatgtgatcactcacttcgaaaactggaagatgaccgtccgcgaagtggacgatgtcgac
gggctgatggtctatcacggcctcaacgcccagaacgaagtggtcacgctgccggaaacc
cagctgtccaacttcatccagttccgtctggcaaccgaccgcctgttcgcgggccagatc
gaccagttgtcctggttttccctgcgctacaacacgctggaacacaccagccgccaattg
cagtcctccctgtgggggctgggtggtgtgcgtgcgcaacctatcgcgcaccagttgcac
atcgctcgcgaagtggctgaccgcattgcgccgcgcgtattgctggccgacgaagtaggc
ctgggcaagaccatcgaagccggtctggtgatccatcgccaactgctgtcggggcgcgcg
agccgggtactgatcctggtgccggagaacctccagcaccagtggctggtcgagatgcgc
cgccgcttcaacctgcaggtcgcgctgttcgacgccgagcgcttcatggagagcgatgca
ggcaatccgttcgaagacacccaactggcgctggttgcgctggagtggctggtctcggat
gaaaaggctcaggacgccctgttcgcggccggctgggacctgatggtggtcgacgaagcg
caccacctggtctggcacgaagacaaggccagcgccgagtactcactggtcgagcaactg
gccgaagtcattcccggcgtactgctgctgaccgccacgcccgaacaactcggtcaggac
agccactttgcgcgcctgcgcctgttggatccgaaccgtttccacgacctcaaggccttc
cgggccgaaagcgacaactatcgccccgtcgctcaggcggtgcaggaactgctcgacaag
ggcgtgctctcggcagaagcgcaaaagaccattcatggcttcctcggtgccgaaggcgac
accctgctggcagccgtcaacgcaggcgacgatgaagccaaggctcgcctgatccgcgaa
ttgctcgatcgccatggcacaggccgcgtgctgtttcgcaacacccgcgccgctgtacag
ggcttccctgagcgcaaactgcatgcctacccgctgccctgcccggccgaatacctggag
ctgccactcggcgaacatcccgacctgtacccggaagtcagctttcaggcccactcggaa
gtcagcgaggaagaacgctggtggcgtttcgatccgcgcgtcgactggctgatcgatacc
ctcaagatgctcaagcgtgtgaaggtgctggtcatctgcgcccacgccgaaaccgcgatg
gacctggaagacgccctgcgcgtgcgctccggcatcccggccacggttttccacgaaggc
atgaacatccttgagcgcgaccgcgctgccgcctacttcgcggatgaagaattcggtgct
caggtgctgatctgctcggaaatcggcagcgaaggccgcaacttccagttctcccatcat
ctggtgctgttcgacctgccgtcccacccggacctgctggagcagcgtatcggtcgtctg
gaccgtatcggccagaaacacatcatcgagctgcacgtgccgttcctggaaaccagcccg
caggcccggctgttccagtggtatcacgaagcgctcaacgcattcctcaacacctgcccg
accggtaacgccctgcaacatcagttcggcccgcgcctgctaccgctgctggaaagcggt
gacgacgatgagtggcaaagcctgatcgacgaggcgcgcgccgaacgtgagcgtctggaa
agcgaactgcacaccggtcgcgaccgcctgctggaactcaattccggtggcgcaggtgaa
ggcgaggcgctggtcgaagacattctggaacaggatgaccagttcagtctgccgatctac
atggaaaccctgttcgacgcgttcggcatcgacagcgaagaccattcggaaaacgcgctg
atcctaaaaccgagcgagaagatgctcgacgccagcttcccgctgggcgacgacgaaggc
gtgaccatcacctacgaccgtaatcaggcgctgtctcgcgaagacatgcagttcatcacc
tgggaacacccgatggtgcaaggcggcatggacctggtgctgtctggctccatgggcaat
accgccgtggcactgatcaagaacaaggcgctcaagccgggcactgtgctgctggaactg
atctacgtcagcgaagtggttgcgccgcgttctttgcaactgggtcgctacctgcctccg
gctgcgctgcgttgcctgctcgatgccaacggcaatgatctgtcgagccgcgtgtcgttc
aacaccttaaacgaccagctcgaaagcgtgccgcgtgccagcgccaacaagttcatccag
gcgcaacgcgatgtgctcacgcctcgcatcaacgcaggtgaagagaagatcacgccgaaa
catgccgagcgcgtggccgaagcgcagcgtcgcctggcagccgataccgaagaagaactg
gcacgcctgacggccttgcaagcggtcaacccgacggtgcgagacagcgaactggtcgcc
ctgcgcacgcagcgtgagcaaggtctggccatgctggaaaaggccgcgttacgtctggaa
gcgattcgggtgctcgtggcgggctga
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