KEGG   Pseudomonas asturiensis: N015_22040
Entry
N015_22040        CDS       T08470                                 
Name
(GenBank) RNA polymerase factor sigma-54
  KO
K03092  RNA polymerase sigma-54 factor
Organism
past  Pseudomonas asturiensis
Pathway
past02020  Two-component system
past02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:past00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    N015_22040
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    N015_22040
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:past03021]
    N015_22040
Transcription machinery [BR:past03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     N015_22040
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID CCDC14 HTH_IclR TrmO_C HTH_21
Other DBs
NCBI-ProteinID: QHF04942
UniProt: A0AA92IWK2
LinkDB
Position
4952780..4954273
AA seq 497 aa
MKPSLVLRMGQQLTMTPQLQQAIRLLQLSTLDLQQEIQEALESNPMLERQEEGDDFDNSD
PLADNIEQKPNPDVQEPTYQESAPTVDNLEDGEWSERIPNELPVDTAWEDIYQTSASSLP
SNDDDEWDFTTRTSVGESLQSHLLWQLNVAPMSDKDRLVAVTLIDCINNQGYLDETLEEI
LESFDPELDIELDEIEAVLHRIQQFEPAGIGARNLSECLLLQLRQLPAKTPWLAEAQRLV
TDYIDLLGSRDYGQLMRRMKLKEDELRQVIELVQSLNPRPGSQIESTEAEYVVPDVIVRK
DNERWLVELNQESVPRLRVNPQYAGFVRRADTSADNTFMRNQLQEARWFIKSLQSRNETL
MKVATQIVEHQRGFLEYGDEAMKPLVLHDIAEAVGMHESTISRVTTQKFMHTPRGIYELK
YFFSSHVSTSEGGECSSTAIRAIIKKLVAAENQKKPLSDSKIAGLLEAQGIQVARRTVAK
YRESLGIAPSSERKRLM
NT seq 1494 nt   +upstreamnt  +downstreamnt
atgaaaccatcgctagtcttgagaatgggccagcagctgacgatgacaccgcagctgcaa
caggcaatccgcttacttcagttatccactctggacctccagcaggagattcaggaggcg
ctggaatctaaccctatgctggaacgtcaggaagaaggcgacgatttcgacaattccgac
cctctggctgacaacatcgagcaaaaacccaatcccgacgtccaggaaccgacctatcag
gagtctgcccccaccgtagacaaccttgaagacggtgagtggagcgaacgcattcccaac
gagctgcctgtcgataccgcctgggaagatatctaccagaccagcgccagcagcctgcca
agcaacgacgatgatgagtgggacttcaccacccgcacctctgtcggtgaaagcctgcaa
agccacttgctgtggcagctcaacgtggccccgatgtccgacaaggatcgtctggtcgcc
gtaacgctgatcgactgcatcaacaatcaaggctatctggacgagaccctcgaagagatt
cttgaatccttcgatcccgaactggatatcgaactggatgaaatcgaagcggtcctgcat
cgcatccagcaattcgaacccgcaggcataggcgcgcgtaacctgagcgaatgcctgctg
ctgcaattgcgtcaattgcctgccaaaaccccgtggcttgccgaagcgcagcgtctggtg
accgattacatcgacctgttgggcagccgcgattacggccagctgatgcgccgcatgaag
ctcaaggaagacgagcttcgccaggtcatcgaactggtccaaagcctcaatccacgtccg
ggctcgcagatcgaatccaccgaagccgaatacgtagtacccgatgtcatcgtgcgcaag
gacaacgaacgctggctggtcgaactgaaccaggagtcggttccccgtcttcgcgtcaat
ccgcaatacgcaggattcgtgcgtcgcgccgacaccagcgccgacaacaccttcatgcgc
aatcagttgcaggaagcccgctggttcatcaagagcctgcagagccgcaacgaaacactg
atgaaggtcgccacacagatcgtcgagcaccagcgtggcttccttgaatatggtgatgaa
gccatgaaaccgctggttctgcacgacattgccgaggcagtgggcatgcacgaatcgacg
atttcccgggtgaccacccagaagttcatgcatacgccgcgcggcatttacgagctgaaa
tacttcttttccagccacgtcagcacctctgaaggcggcgaatgctcatccacggctatt
cgcgcaatcatcaaaaaactggttgctgccgaaaatcagaaaaagccgttgagtgatagc
aagatcgctggtttactggaggcacaaggcattcaagtagcccgccgcacagtcgccaag
taccgcgaatcccttgggattgcgccctccagcgagcgcaagcgactgatgtga

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