Pseudomonas asturiensis: N015_23065
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Entry
N015_23065 CDS
T08470
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
past
Pseudomonas asturiensis
Pathway
past03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
past00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
N015_23065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
past03000
]
N015_23065
03400 DNA repair and recombination proteins [BR:
past03400
]
N015_23065
Enzymes [BR:
past01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
N015_23065
Transcription factors [BR:
past03000
]
Prokaryotic type
Helix-turn-helix
AraC family
N015_23065
DNA repair and recombination proteins [BR:
past03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
N015_23065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
TetR_N
HTH_23
Motif
Other DBs
NCBI-ProteinID:
QHF05127
LinkDB
All DBs
Position
complement(5180567..5182012)
Genome browser
AA seq
481 aa
AA seq
DB search
MNTLDPDICYAAFIARDRRFDGWFFMGVSSTGIYCRPMCPVRAPQARNCSFYRTTAAAEQ
AGFRPCLRCRPELAPGQSLLDMSSRLAQAAARLIEEGFLGGKTLDALAERVGVTSRHLRR
IFEAEFGVSMIDFAQTQRLLVAKRLLTDTGLSMTEVALAAGFGSVRRFNDVFQARYGLNP
TRLRKTVKSADDAGLRFELSYRPPFSWQGVLAFLAHRCIAGVEHVADDVYARVIEVEHAG
QMLTGWISVTDAPQRHALVVTMSASLQSAVAVVLGRVRRVFDTGCRPDLVDAHLGPLIGD
LQGMRVPGAFDGFEIAVRAVVGQQISVLNARAILSRIAERFGTPVSDAPFGLHHAFPTAQ
AVATLRDEDLIATGLIRIRAEAILAVAQEVASGRIRLEPLVPLDETLAELRHIRGIGEWT
VQYIAMRALGWPNAFPEGDAVLKKRLGCTTAAQLNEHASQWAPWRAYATVHVWHQREETP
S
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgaacactctcgatcccgacatttgctacgccgcgtttatcgccagggaccgccggttt
gacggctggtttttcatgggcgtgtcgtcgaccggtatctattgtcggccgatgtgcccg
gtgcgagcgccgcaagccagaaactgcagtttctacagaaccactgcggcggcggagcag
gcaggatttcgtccgtgcttgcgctgtcgcccggaactggcgcccggacagagccttctg
gacatgtcgagccggttggcacaggccgcagcccggctgatcgaagaaggctttctgggc
ggcaaaacactggatgcgctggccgagcgggtgggcgtcacgtcgcggcatctgcggcgg
atcttcgaggccgaatttggcgtctcgatgatcgatttcgcccagacgcaacgcctgctg
gttgccaagcgcctgttgaccgataccgggctgtccatgacggaagtcgctctggcggca
ggctttggcagcgtgcggcgcttcaatgatgtctttcaggcgcgctatggattgaatccc
accaggctgaggaaaacagtgaagagcgccgacgatgcaggtctgcgcttcgagttgtcc
taccggccaccgttttcgtggcaaggcgtgttggcctttctcgcgcatcgttgcatcgct
ggcgtcgagcatgtggccgatgacgtttatgcgcgtgtcattgaggtcgagcatgcgggg
cagatgctcaccggctggatcagcgtgaccgatgccccgcagcgacatgcgctggtggtg
acgatgtcggcttcgttgcagtcggcggttgcggtggtgctggggcgtgtacggcgggtc
ttcgatacgggctgtcggccggacctggtggacgcgcaccttgggccgctgattggcgat
ctgcagggcatgcgcgttcccggtgcgttcgatggctttgaaatcgcagtgcgggcggtg
gtcgggcagcagatatcggtgctcaatgcccgagcgattctgagccggattgccgagcga
tttggcacgccggtgagcgatgcaccttttggactgcatcatgcgttcccgacggcgcag
gccgttgcaacgctgcgtgatgaagacctgatcgccacggggcttatccgtattcgggcc
gaggcgatccttgcggtcgcccaggaagtggcgtcagggcgcatccggcttgaaccgttg
gtgccgctcgatgaaacgctggctgagctgcgtcatattcgcggcatcggcgagtggacc
gtgcaatacattgccatgcgcgccctgggctggcccaatgcgttccctgagggcgatgcc
gtgctcaaaaagcgcctgggttgcacgacagccgcgcaactcaatgagcatgcgagtcag
tgggcaccgtggcgggcttacgcgaccgtgcatgtctggcatcaacgtgaggagacacca
tcatga
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