Pseudomonas asturiensis: N015_24500
Help
Entry
N015_24500 CDS
T08470
Name
(GenBank) aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
past
Pseudomonas asturiensis
Pathway
past00260
Glycine, serine and threonine metabolism
past00460
Cyanoamino acid metabolism
past00630
Glyoxylate and dicarboxylate metabolism
past00670
One carbon pool by folate
past00680
Methane metabolism
past01100
Metabolic pathways
past01110
Biosynthesis of secondary metabolites
past01120
Microbial metabolism in diverse environments
past01200
Carbon metabolism
past01230
Biosynthesis of amino acids
past01240
Biosynthesis of cofactors
past04981
Folate transport and metabolism
Module
past_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
past00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
N015_24500
09102 Energy metabolism
00680 Methane metabolism
N015_24500
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
N015_24500
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
N015_24500
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
N015_24500
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
N015_24500
Enzymes [BR:
past01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
N015_24500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Phage_capsid
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
QHF05391
LinkDB
All DBs
Position
complement(5465812..5467065)
Genome browser
AA seq
417 aa
AA seq
DB search
MFSKQDQIQGYDDALLAAMNAEEQRQEDHIELIASENYTSKRVMQAQGSGLTNKYAEGYP
GKRYYGGCEHVDKVEQLAIERAKQLFGADYANVQPHSGSQANAAVYLALLQAGDTVLGMS
LAHGGHLTHGAKVSFSGKLYNAVQYGIDTHTGLIDYDEVERLALESKPKMIIAGFSAYSK
TLDFPRFREIADKVGAYLFVDMAHVAGLVAAGLYPNPLPYADVVTTTTHKTLRGPRGGLI
LARANEELEKKFNSAVFPGGQGGPLMHVIAAKAVCFKEAMEPGFKAYQQQVIDNAQAMAQ
VFIDRGFDVVSGGTDNHLFLVSLIRQGLTGKDADAALGRAHITVNKNSVPNDPQSPFVTS
GLRIGTPAVTSRGFKVTQCIELAGWICDILDNLGDADVEANVASQVAALCSDFPVYR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaagcaagaccagatccagggttatgacgacgcactgttggcggcgatgaat
gccgaggagcagcgtcaggaagaccatatcgagctgatcgcctcggagaactacaccagc
aagcgcgtcatgcaggcccagggcagcggcctgaccaacaagtacgccgaaggctatccc
ggcaagcgctattacggcggttgcgagcatgtcgacaaggtcgagcaactggccatcgag
cgcgccaaacaactgttcggtgccgattacgccaacgtccagccgcactccggcagtcag
gccaacgctgcggtctatctggcgctgctgcaggccggcgacaccgtgctgggcatgagc
ctggcccatggcggtcacctgactcacggcgcgaaagtcagcttctccggcaagctgtac
aacgctgtgcaatacggcatcgacacccacaccggcctgatcgactacgacgaagtcgag
cgtctcgcgctggaaagcaagccgaagatgatcattgccggtttctcggcctactccaag
acgctggatttcccgcgcttccgggaaatcgccgacaaggtcggtgcctacctgttcgtc
gacatggctcacgtggcaggtctggtggccgcaggcctgtacccgaacccgctgccttat
gccgacgtcgtcaccaccacgacccacaagaccctgcgcggcccgcgtggcggcctgatt
ctggccagggccaacgaagagctcgaaaagaaattcaactccgccgtgttccccggcggt
cagggcggcccgctgatgcatgtcatcgccgccaaggctgtgtgcttcaaggaagccatg
gagccaggtttcaaagcctatcaacaacaagtgatcgataacgcccaggccatggcacag
gtgttcattgatcgcggcttcgatgtcgtttccggcggcactgacaaccacctgtttctg
gtcagcctgatccgtcagggcctgaccggcaaggacgccgacgctgcactggggcgtgcg
cacatcaccgtcaacaagaactcggtgcccaacgacccgcaatcgccgttcgtgacgtcc
ggtctgcgtatcggcaccccggcggtgaccagtcgcggtttcaaggtgactcagtgcatc
gaactggcgggctggatctgcgacatcctcgacaacctcggtgacgccgatgtcgaggcc
aacgttgcgagtcaggtcgccgcactgtgttccgatttcccggtttatcgctga
DBGET
integrated database retrieval system
