Pseudomonas asturiensis: N015_25925
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Entry
N015_25925 CDS
T08470
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
past
Pseudomonas asturiensis
Pathway
past00300
Lysine biosynthesis
past00470
D-Amino acid metabolism
past01100
Metabolic pathways
past01110
Biosynthesis of secondary metabolites
past01120
Microbial metabolism in diverse environments
past01230
Biosynthesis of amino acids
Module
past_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
past00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
N015_25925 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
N015_25925 (dapF)
Enzymes [BR:
past01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
N015_25925 (dapF)
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Paralog
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
QHF05666
UniProt:
A0ABX6HJ98
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All DBs
Position
5783600..5784430
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AA seq
276 aa
AA seq
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MLLRFTKMHGLGNDFMVLDLVSQHAHILPKHAKQWGDRHTGVGFDQLLLVEAPNNPDVDF
RYRIFNSDGSEVEQCGNGARCFARFVLDKRLTAKKQIRVETKSGIIELDIRSDGQISVNM
GPPRLIPDEIPFQAAAQATSYTVDVDGQSVELAAVSMGNPHAVLRVDDINNAPVHELGPK
IEHHPRFPARVNVGFLHVVDRQRAQLRVWERGAGETQACGTGACAAAVAAITQGWMMSPL
LIDLPGGRLSIEWAGPGHPVMMTGPAVRVYEGQVRL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgcgttttaccaaaatgcacgggctgggtaacgacttcatggtcctggacctg
gtcagtcagcacgcgcatattctgcccaagcacgccaaacagtggggcgaccggcacact
ggtgtgggcttcgatcaactcctgctggtcgaagcaccgaacaacccggacgtggatttt
cgctaccgcatcttcaattccgacggttcggaagtcgagcaatgcggcaacggcgcacgc
tgctttgcacgtttcgtgctcgataagcgcctgaccgccaaaaaacagatccgcgtcgaa
accaaaagcggcatcatcgagctggatatccgtagcgacgggcagatcagcgtcaacatg
ggcccgccgcgcctgattccggacgagattccgtttcaggccgcagcccaggcgaccagc
tacaccgtcgatgttgacggacagagcgttgaactggccgccgtctcgatgggcaatccc
catgcggtactgcgcgtggatgacatcaataatgcgccggttcatgagctgggcccgaag
atcgaacatcacccgcgctttcccgcacgggttaacgtagggttcctgcatgtcgtggat
cgccagcgcgcacaattgcgggtctgggagcgtggtgcaggggaaacccaggcgtgcggc
accggcgcttgtgctgctgcagtggccgccattacccagggctggatgatgtcgccgctg
ttgatcgacctgcctggcgggcggctgtccattgaatgggcagggccggggcatcctgtg
atgatgaccggcccggccgtcagggtttacgaaggccaggttcgtctttaa
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