Paenibacillus sp. S02: KAI36_00199
Help
Entry
KAI36_00199 CDS
T11472
Symbol
rnr
Name
(GenBank) Ribonuclease R
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
pasz Paenibacillus sp. S02
Pathway
pasz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pasz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KAI36_00199 (rnr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pasz03019
]
KAI36_00199 (rnr)
03016 Transfer RNA biogenesis [BR:
pasz03016
]
KAI36_00199 (rnr)
Enzymes [BR:
pasz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
KAI36_00199 (rnr)
Messenger RNA biogenesis [BR:
pasz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
KAI36_00199 (rnr)
Transfer RNA biogenesis [BR:
pasz03016
]
Prokaryotic type
tRNA degradation factors
KAI36_00199 (rnr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QYK65095
LinkDB
All DBs
Position
222706..225321
Genome browser
AA seq
871 aa
AA seq
DB search
MITEQQLLDFMRETAYKPMTYQELEQHFDIKDAEDFREFLKLLNALEEEGKILLTSTNRY
GVPERMDLQRGRLQAHAKGFAFLIPEDREHPDVYIHANDLKSAMNGDTVLVRVSSKGPAG
GRLEGEVVRIVKRAVLQVVGVFQSHEAYGFVLPDDKRINRDIFIPKTSFNGAVNGQKVVV
RIVSYPEGRAAAEGEVLEVLGHKDDPGVDILSVIRKHQLPEAFPDEVTEEAEKAPDAITE
EEIVRQGRRDLRDKIIVTIDGEDAKDLDDAVNVERLPNGNYRLGVHIADVGYYVRENSKL
DQEAYNRGCSVYLVDRVIPMLPHRLSNGICSLNPQVDRLALSCEMEFNEHMKVVKHDIFT
SVIKTKERMTYTNVRKILKEEDAELMERYKDLVDVFGTMKELALKLRANRMRRGAVDFDF
DEAKVIVDNEGKAVDIVKRERTIAEQIIEEFMLAANETVAEHFHWLKVPFLYRIHEDPDP
EKLQNFMAFAANFGHQIKGRGNSIHPRALQTLLEDIQGTKEQTVLSTMMLRSMKQAKYDA
ETTGHFGLAAEYYSHFTSPIRRYPDLVIHRVIREVLENGGALTAERQEYLTARMPDIAQQ
SSERERVAVDAERDTEQMKKAEYMLDKVGEEFEGIISSVTSFGMFIELDNTVEGLTRLSA
LTDDYYHFDEQHMALIGERTSKVFRIGDEVKVRVARVNMEDYTIDFELVDMKQRQRRERT
GGSGQGGGFARGGEGRGKGKPHEGRDRKGGKDKTGKERKGGRDAAGKPKEAGTGVGGGGI
STAGRSGRGGAGAGSASSFGFGSGKGGYNSPASGASKRRKKTSASGIFIGGAATPGSDAR
PNGEGAARRKRKNKGGSGGNSTAGFVRKKKK
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgataacagagcaacaactactcgattttatgcgcgagactgcatacaaacccatgact
taccaggagctggagcagcactttgatattaaggatgcggaagatttccgtgaatttctt
aagctcttgaatgccttggaggaagaggggaaaatcctgctgaccagcacaaaccgttat
ggcgtgccggaacggatggatttgcagcgtgggcgtttgcaggctcatgccaagggattt
gcctttctaattccagaggaccgggagcacccggatgtatatattcatgccaacgactta
aagagtgcgatgaatggagatacggtactggtaagagtgtcctcgaagggacctgcgggc
ggtcgattagaaggtgaagttgtacggatcgtgaagcgcgcagtgcttcaagtagtaggc
gtgtttcagagccacgaagcatatggtttcgttttgccggatgataagcgtattaaccgg
gatattttcattccaaaaacaagcttcaatggagctgtaaacggtcaaaaggtcgttgtg
cgtattgtgagctatccagaaggacgagcagcggcggaaggcgaagtgttggaagttttg
ggtcataaggatgatccgggcgtcgacattttgtcagttattcgcaagcatcagcttccg
gaagcttttccagatgaagtgacagaggaagcggagaaggctcctgatgcgattacggaa
gaagagattgtacgtcagggacggcgcgacctgcgtgataagatcattgttaccattgat
ggcgaggatgccaaagacctggatgatgctgtaaatgtagagcgcttgccgaacggaaac
taccgtctgggcgttcatattgccgacgtagggtattatgtgcgtgagaactctaagctg
gatcaggaggcatataaccgcggttgtagcgtgtatttggttgatcgtgtcattcctatg
cttccacatcgtctttcgaacggaatatgttctttgaatccacaggtggatcgactggct
ttatcctgtgagatggaattcaatgagcatatgaaggttgtaaagcatgatattttcacc
agtgtgattaaaacgaaggaacggatgacgtacactaacgttcgcaaaatcctcaaagag
gaagatgctgaactgatggaacggtacaaagatctcgttgatgtattcggcacgatgaag
gaattggcattgaagctgcgtgctaatcgaatgcgccgaggtgcggttgattttgatttt
gatgaagctaaagtgattgtggataatgaaggaaaagctgtagatattgtgaagagagag
cgtacgatagctgaacaaattattgaagagtttatgttggcagccaatgaaacggtagcc
gaacatttccattggctcaaagtacctttcttgtaccggattcatgaggacccagatccg
gagaagctgcaaaactttatggctttcgcagctaattttgggcatcagatcaaaggtaga
ggaaattccattcatccgcgtgcactgcaaacgttgctggaagatattcagggtacgaag
gagcaaaccgtgcttagcacgatgatgctgcgttcgatgaagcaggcaaagtatgatgcg
gaaacgacaggacattttgggctagcagcggagtactactctcattttacatcgccgatt
cgtcgttaccctgacttggtgattcaccgtgtcattcgtgaggtattggagaatggcggg
gctttaacagccgagcgtcaggaatatttgactgcacgtatgcctgatattgcgcagcaa
tcttccgagcgtgaacgtgtggctgtggatgcagaacgtgatacagagcagatgaaaaag
gctgaatacatgctggataaggtcggcgaggaattcgaggggattatcagcagtgtaacc
agctttgggatgttcattgagctggacaatacagtggagggtctgacgcgtctgagtgcg
cttacggacgactattatcactttgacgagcagcatatggcgttgattggcgaacgcact
tccaaggtgttccgcattggggatgaggttaaggttcgcgtcgcgcgcgtgaatatggaa
gattacacaattgactttgaacttgtcgacatgaagcaacggcaacgccgtgaacggacg
ggcggttcaggacagggcggaggttttgcgcgtggcggtgagggccgaggtaaaggcaag
ccccatgaagggcgcgaccgtaagggtggcaaggacaagactggcaaagagcgtaaaggc
ggtcgtgatgctgccgggaagcctaaagaagccggtacaggcgtaggtggcggaggtatt
agcaccgcaggtcgttcagggcgcggcggagctggagccggctcagctagcagcttcggc
tttggcagtggcaagggcgggtataactcgccagcatccggggcaagcaagcgacggaag
aagacgtctgccagcggtattttcatcggcggagcagctacaccaggtagtgatgccaga
ccaaacggtgaaggcgcagcacgtcgcaagcggaagaataagggcggaagtggcggcaat
agcaccgcgggctttgtgcggaaaaagaagaagtag
DBGET
integrated database retrieval system
