Paenibacillus sp. S02: KAI36_01682
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Entry
KAI36_01682 CDS
T11472
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pasz Paenibacillus sp. S02
Pathway
pasz03030
DNA replication
pasz03430
Mismatch repair
pasz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pasz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KAI36_01682 (dnaE)
03430 Mismatch repair
KAI36_01682 (dnaE)
03440 Homologous recombination
KAI36_01682 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pasz03032
]
KAI36_01682 (dnaE)
03400 DNA repair and recombination proteins [BR:
pasz03400
]
KAI36_01682 (dnaE)
Enzymes [BR:
pasz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KAI36_01682 (dnaE)
DNA replication proteins [BR:
pasz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KAI36_01682 (dnaE)
DNA repair and recombination proteins [BR:
pasz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KAI36_01682 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
DUF6282
HROB
Motif
Other DBs
NCBI-ProteinID:
QYK66539
LinkDB
All DBs
Position
1889646..1893323
Genome browser
AA seq
1225 aa
AA seq
DB search
MSSFVHLHVHSEYSLLDGAARTAELVKQASAYGMKALALTDHGVMYGAIPFYRACVENGI
KPIIGCEAYMTAGSRKERGSRKDQPIYHLILLAKNKTGYQNLMKLCSIGHLEGFHYKPRI
DMEALAAHHEGIICLSACLGGEVPQHLLHGREAEARRAAERYRNIFGDDFYLELQDHGLS
EQKRVNPLLIALAKELDIPLVATNDVHYLTEPDADVQDVLICIGTGKTVDDEERLRIPTR
QLYLKSQEDMARLFPHVAEAIANTVRIAEKCELELEFGQSILPEYRPLPEGMTSSSYLRN
LCVQGLERRYGSDPRWEQPEERERLNQRLSYELNTIDSMGFSDYFLIVWDFIAFAHKHKI
ATGPGRGSSAGSLVAYVLNITNVDPMKYNLLFERFLNPERISMPDIDIDFSDERRDEVID
YVVQKYGNEHVAQIITFGTLAARAAVRDVGRVLNVPYGEVDKAAKLIPAQLGINIRHALE
ITPELKTLYETKPKTRELLDMAIKVEGMPRHASTHAAGVVISRTPLTDAVPLQQGSEGVP
LTQYSMENLERIGLLKMDFLGLRTLSIIERCIHWIAEDHGETPDFSRIPDNDPHTYDLLG
KGDTGGVFQLESAGVRRVLKDLKPSVFEDIISVLALYRPGPMGFIPNFIQAKHGQIEISY
PHPDLEPILKDTYGIIVYQEQIMQIASRMAGFSLGEADLLRRAVSKKKREVLDLERGHFV
EGSIKQGYTEEEAGRVYDMIVRFADYGFPRAHAAAYGVLAFQTAYLKAHYPVQFMASMLT
AVMGSHRKVAEYVVECRRMDIAVLPPDVNESGVLFTPLQQGGIRFGLAAIKNVGTQAMES
ILAVRKERPFDSLLDFCRRVDLRVCNKRVIESLIQAGAFDSLTGHRAQLLAMLDETVDAA
VKWRKERDDLQIDMFGFVEMPNWDIEYPNVPQFSASQQLELERELLGLYLSGHPLDDFES
LLESSEADRLMELGDVPDETVVVTAGMVVSLKTITTKQGKAMAFIELEDQIERCEVVLFP
EVWKRSQQWIEKGALLTLRAKMQQQDEHFKLLADETAPLAEDSLARLLQRRRASTRSSAV
AGTSVPATGSAAGGPGGRASRVSPPPSAAHASASPQPKAARPVTAASPRGAEADRGEQVP
GPRNSEPTTRQRVFVKITRQAEEDASLLVSLKALLQEHPGAMPTVLFYESNQRLLALSDA
YNIKPSPQLFDQMESMLGEGTVKVK
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atgagttcatttgtccatttgcatgttcatagcgagtacagcctgctggacggcgcggct
cgtaccgcggagttggtcaaacaggcatcagcttacggaatgaaggcgctggcccttaca
gatcacggggtcatgtacggtgccattcctttttatagagcgtgtgtagagaacggcatt
aagccgattatcgggtgtgaggcctatatgacggcaggatcgcgcaaggagcgtggcagc
cggaaggatcagcccatatatcatttaattttgctcgccaaaaataaaacaggctatcaa
aatctgatgaagctgtgctccatcggccatttggagggctttcactacaagccgcgcatc
gacatggaggctttggctgcccatcatgaaggaatcatatgcctgagcgcttgtttgggc
ggtgaagtgccacagcatttactgcatggtcgggaagctgaagcacgacgagcagcggaa
cgatatcgtaacatttttggcgatgatttttatctggaactccaggatcatggtctatcg
gagcaaaaacgcgtaaatcctctcttgatcgcactggcgaaggaactggatattccactg
gtggcgacgaatgacgtgcattacttgactgagccagatgcggacgtgcaggacgttctg
atctgtatcgggacagggaagacagttgacgatgaggagcgcttgcgtataccaacacgt
cagttgtatctgaaaagtcaggaggatatggctcgcttattcccacatgtggcagaagcc
atcgccaacacggtgcgtattgctgaaaaatgcgaactggagctggaattcggtcaatcc
attttacctgaatatcgtccactgccggaaggaatgacctcttcgtcctatttacgcaat
ttgtgcgtgcaagggctggagcgtcgctatggaagcgatcccagatgggagcagccggag
gaacgggaaaggctgaaccaacggctaagctatgagttaaataccattgacagtatgggt
ttcagcgattatttcctgattgtatgggattttattgccttcgctcataagcataagatt
gcaacgggaccggggcggggttcctcagcaggcagtttggttgcctatgtgcttaacatc
acgaatgtcgatccgatgaaatacaacctgctctttgaacggtttctgaatcccgaacga
attagtatgccggatatagatattgattttagtgatgaacggcgtgacgaggttatcgac
tatgtagtacagaagtacggaaatgagcatgtagcgcaaatcattacctttggaacgctg
gcggcaagagccgctgtccgtgacgtcggtcgtgtattgaacgtgccatatggcgaggtg
gacaaggcagccaagctgattccggcgcagctaggcattaatatccgtcatgcgctggaa
atcaccccggagctgaaaacgctatatgaaacgaagcctaagacacgtgaactgctggat
atggcgatcaaggttgaaggaatgcctcgtcatgcttcgacacatgctgcaggtgttgtc
atttcgcggactccattgaccgatgcggttccgcttcaacaggggagtgaaggggtacct
ttgacgcagtactcgatggaaaatctagagcgcattggtttgcttaaaatggatttcctt
gggctgcgtacgctctccattattgaacgatgcatacactggattgcggaagaccatgga
gaaacccctgattttagccgtattcccgataatgatccgcatacctatgacttgctgggc
aaaggagatacaggaggcgtattccagctggagtcggccggtgtacgccgggtactcaag
gatttgaagccgagtgtattcgaggatatcatttctgtcctggctttgtatcgtccgggc
ccgatgggctttattcctaactttatacaggccaagcatggtcagattgagatttcttat
ccgcatcctgacctggaaccgatcttaaaggatacgtacggtattattgtgtatcaggag
caaatcatgcagattgcttcgcgcatggcgggtttttccctgggagaagccgatctgttg
cgccgggctgtgtccaagaaaaagcgcgaagtgctggatctggagcgcgggcattttgtc
gaaggcagtatcaagcagggatacacggaggaggaggccggaagggtttacgatatgatt
gtccgttttgctgactacggcttcccacgtgctcatgcagctgcttatggtgtgctagca
tttcagacggcttatttaaaggcccattatccggtacaatttatggcttcaatgctgaca
gcggtgatgggaagtcatcggaaagtggctgaatatgttgtcgaatgccgtcgtatggat
atcgcagtgttgccacctgatgtgaatgagagtggggtgctgtttactccgttacagcag
ggaggcatccgcttcggcctggctgcgattaaaaatgtcggcacacaggcgatggagagc
attctcgctgttcgcaaggaacggcctttcgacagcctgctcgatttttgtcgacgtgtc
gatttacgggtatgtaataagagagtaattgaatcgcttattcaggcaggggcctttgat
tcgttgacgggtcatcgggcacagttgcttgccatgctggatgaaacggtggatgcagcc
gtcaaatggcgcaaggaacgggatgacttgcaaattgatatgtttggttttgtggaaatg
cccaattgggatatcgaatatcccaatgtaccccaattcagcgccagccagcaattagag
ctggaacgtgaactgctgggactgtatttgtcggggcatccgttggatgattttgagtcg
ctgttggaaagtagcgaggcggatcgtttgatggagctgggcgatgtccccgatgaaacg
gttgttgtgactgcaggcatggtagtgtcactcaaaacaattacgaccaagcagggtaag
gctatggcctttattgagttggaggatcagattgagcgctgtgaggttgtgctgtttcct
gaggtatggaagcgaagccagcagtggattgaaaagggagctttgcttacgcttcgagcc
aagatgcagcagcaggacgagcacttcaagctccttgcggatgagaccgccccgctggcg
gaagactcgctggcacggctcctccaacgccgacgtgccagtacgcgttcgtccgcagta
gctggaacatccgtaccagctactggctctgctgctggcggtccaggcggaagagcgtca
cgtgtgtcgcccccgccttcggcagcccatgcatctgcttcgcctcagccgaaggcggcc
cgtcccgtgacggctgcttcaccgcgcggagccgaagccgatcgcggtgagcaggtgccg
ggcccgcgcaactcggagccaaccactcgtcagcgggtgtttgtcaaaatcactcgccag
gccgaggaggacgccagcttgctggtcagtctcaaggcactgctacaggagcatcccggt
gctatgcctaccgtacttttttatgagagcaaccagcgtctgctggcgttgagcgatgct
tataacattaagccttctcctcagctttttgatcaaatggagtcgatgttgggtgaaggc
acggtgaaagtcaaatga
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integrated database retrieval system
