Paenibacillus sp. S02: KAI36_01832
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Entry
KAI36_01832 CDS
T11472
Symbol
cshA_1
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshA
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
pasz Paenibacillus sp. S02
Pathway
pasz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pasz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KAI36_01832 (cshA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pasz03019
]
KAI36_01832 (cshA_1)
03009 Ribosome biogenesis [BR:
pasz03009
]
KAI36_01832 (cshA_1)
Enzymes [BR:
pasz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KAI36_01832 (cshA_1)
Messenger RNA biogenesis [BR:
pasz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KAI36_01832 (cshA_1)
Ribosome biogenesis [BR:
pasz03009
]
Prokaryotic type
rRNA helicases
KAI36_01832 (cshA_1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QYK66686
LinkDB
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Position
2044670..2046262
Genome browser
AA seq
530 aa
AA seq
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MTTFAEFDLEPKVIQAITELGFEEATPIQSQSIPIALQGRDMIGQAQTGTGKTAAFGIPL
INKISKSDEKIRALIMAPTRELAIQVAEEIEKLSRFKGLRTLPIYGGQDIVRQIRALKKK
PQIIIGTPGRLLDHINRKTIKLEDVNTVVLDEADEMLDMGFMEDIQSILKQVPDERQTML
FSATMPPNIKRLAEQFLKNPEHVSVIPKQVSAPLIDQAYIEVPERQKFEALSRLIDMESP
ELAIVFGRTKRRVDELAEALQKRGYSADGLHGDLSQNQRDAVMRKFRDGSIDVLVATDVA
ARGLDVSGVTHVVNFDLPQDPESYVHRIGRTGRAGKEGEAWSFVTPREIDHLHFIERVTR
HRIPRKPLPTLAEALEGKQRIIAERLLEAVESGELNEYKGLAIQMLEQYDSVQLLSAALK
LMTGEKREASIELTPEDPIRAKRRKPDVRSGGRKPSNYSGRSNGGYNSNRSGGTGGSGSK
GGYGGYNRGKEGGGGYNRDSGSRYSGDRKPRPSSNGETRRPARREDSSSE
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
ttgacgacatttgcagaatttgatcttgaaccgaaagtaattcaggcgattacagaactg
ggttttgaagaagcaacaccaattcaatcccaatccatcccgattgcactgcaaggcaga
gacatgattggccaagcccaaacaggtactggtaaaactgctgcgtttggtattccgctg
atcaacaaaatttctaaaagcgacgaaaaaatcagagccctgatcatggcaccaacacgt
gagcttgctatccaggtagctgaagaaatcgaaaaactctcccgtttcaaaggtcttcgt
actttgccaatctatggtggacaagatatcgtacgccagattcgtgctttgaaaaagaaa
cctcaaattattattggtacgccaggacgcttgcttgaccatattaatcgcaaaaccatc
aagctggaagatgtaaacacagttgttttggatgaagcagatgaaatgttggatatgggc
ttcatggaagatattcaatccattctgaagcaagttccagacgagcgccaaacgatgctt
ttctcggctacaatgcctcctaatattaaaagattggctgagcaattcctcaaaaatcct
gagcatgtttcagttattcctaaacaagttagtgctccactgattgatcaggcctatatc
gaagttcctgagcgtcaaaaattcgaagcattgagccgtttgatcgacatggaatcccca
gaacttgctatcgtatttggtcgtaccaagcgtcgggtagacgagctggctgaagctctg
caaaaacgcggatattctgcagacggtttacacggtgacttgtctcaaaatcaacgtgat
gctgtaatgcgtaaattccgtgacggaagcattgacgtgctcgtagcgactgacgtagct
gcccgtggtttggacgtttccggcgtaactcacgttgtgaactttgaccttccgcaagat
ccagaaagctatgttcaccgtattggacgtactggacgtgcaggtaaagaaggggaagct
tggtctttcgtaacgcctcgtgaaattgaccatctgcactttatcgaacgtgtaactcgt
caccgcattccacgcaagccgcttccaacgttggctgaagctctggaaggcaaacaacgt
atcattgctgaacgtctcctagaggctgtagaaagcggtgagctgaacgagtacaaaggt
ttggctattcaaatgctggagcaatatgattctgtacaacttctctccgcagctctgaaa
ctgatgactggtgagaaaagagaagcatcgattgagctgactccagaagatccgatccgt
gcaaaacgtcgtaaaccagacgtgcgttctggcggtcgcaagccttccaactatagcggt
cgcagcaacggtggttacaattccaaccgttctggcggtaccggcggtagtggaagtaaa
ggtggatatggcggttacaaccgcggcaaagaaggcggcggtggctacaaccgtgattcc
ggaagccgctacagtggagatcgtaaaccacgcccgagcagcaatggggaaactcgtcgt
cctgcaagacgtgaagattcctcttccgaataa
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