Paenibacillus sp. S02: KAI36_03605
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Entry
KAI36_03605 CDS
T11472
Name
(GenBank) Putative exonuclease SbcCD, C subunit
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pasz Paenibacillus sp. S02
Brite
KEGG Orthology (KO) [BR:
pasz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pasz03400
]
KAI36_03605
DNA repair and recombination proteins [BR:
pasz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KAI36_03605
Archaeal homologous recombinant proteins
KAI36_03605
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
SbcC_Walker_B
AAA_29
AAA_21
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
QYK68452
LinkDB
All DBs
Position
complement(4045383..4048778)
Genome browser
AA seq
1131 aa
AA seq
DB search
MKPILLKLAGLQSYRESQEIRFDDLTETGLFGIFGPTGSGKSTLLDAITLAMYGKVERAV
NGTQGIMNHAEDTLSVAFTFELMSAQGPRRYRVERRFKRAGGVSVNNTLSRFIALTEDGE
EVLADKVQDVTRCVEEYIGLKMDDFTRAVVLPQGKFAEFLSLKGSERRQMLQRLFHLEKY
GDQLAQKLSRRVKDNDSALKALEAEQQGLGDASAEALEHVESRLKEAIANAEASRRELER
VSRESEALNKTRELVIELSQRSNELEQLAAQEPGITLLERKLRQATAAEALLPALTDWKE
AIAEAEKRQKTAEEMEVLAATAQEAALVSAQADEQARQALSAEEPKLLLRIDQLEQALQL
ERDSEALRTERERLAAELVQSEQTLAEHAEGLAKEQELQTRGLKRQQELQQELKQNEVRA
DERRMLQEAVQRLQQLEIANEQLREAELEYATQEKRLAQADERLKLTDQETQETEARRSA
LAAQAADGIESLLTLEAEITADMSSLASEEEQLRHELRAEELGRLAQHLAAELREGEPCA
VCGSLHHPAPAVVAAHSADAAAPDELHRLRLGLQELRLTLRQQLHEQRSLLAQPATADSG
AAATGEPFTPAAAPAEPRGAAAWAERCTALERAAAELAARAHTLPAEAQALREADAAGQQ
RRIRAAAEQEAAAAALTQARSKREACTTRSEGLRAEWAAQLTDVAPSEAAERYRAMQERD
GRAEELRSRLETSVTFLEGKAERVQQIQQSIIEEDKIIIARRTGLQSKDDSLREKLAQLR
KWVGDGQAASLLEEATSRLRGLKNGAEAAARRRTEAEERKQQAVHASLIARQASDSAEER
RQMAESRWGSRLEASSFATEAEVMECCLGPEEAARYEREVSLHREREKELSSRLKHVEEQ
LNGATVTEEQWETATAQLRDCRARDEEALQNRAKAERDLEDLQHRHVRWMKLESNRIHLR
SEAEKMSKLQSVFRGNAFVEYIAEEQLMQVSQSASRRLRFLTKQRYALEVDSSGGFVISD
DANGGVKRPVSTLSGGETFLTSLSLALALSAQIQLRGQYPLQFFFLDEGFGTLDPELLDT
VITSLEKLHHDQLSVGVISHVPELRARLPRKLVVLPAEQAGGGSRVVMETF
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccaatccttctaaaactggcggggttgcaaagctaccgggagtcgcaggaaatt
cgttttgacgatttgaccgaaactggactgttcgggatatttggcccaacgggtagtgga
aaatcaacgctgctggatgccattacgttggctatgtatggtaaagtggagcgggcagtg
aatggtacacaaggcattatgaaccatgctgaggatacgttgtctgttgcatttacgttt
gaattaatgtcagctcaagggcctcgtcgttaccgtgtagaacgacgtttcaaacgtgct
ggaggcgtatcggttaataatacgcttagccgttttattgcgttaacagaggatggcgaa
gaagtgcttgccgataaggtgcaggatgtgacgcgctgtgtggaggagtatatcggccta
aaaatggacgattttacacgagctgtcgtattgccgcagggaaagtttgcggaattcttg
tccttaaagggcagtgaacgtagacagatgctacagcgtttgttccatctggagaagtac
ggagatcaacttgcacagaagctaagccgtcgtgtgaaagataacgatagcgcactgaaa
gcgttagaggcggagcagcaagggctgggggatgcgagtgctgaagcgcttgaacatgta
gagtcgcgtctaaaagaggcgattgccaacgcagaagcttcgcgtcgcgagctagagcgt
gtctcacgtgaatcggaggcgctcaacaaaacccgtgagctggtcatcgagctcagccaa
agatcgaacgagctggagcagttggcagcacaggagccgggcattactttgctggagcgc
aagcttcgacaagcaactgcagccgaggcattgctgcctgcgctgacggattggaaggaa
gccattgctgaagcggaaaaacggcaaaagactgccgaagaaatggaagtcctggccgct
accgcgcaggaggctgcgcttgtgtctgcacaagcagatgagcaggcccggcaagcactc
agtgccgaagaaccgaagctattgcttcggatcgaccaactagagcaggcgcttcaactg
gagcgtgattcggaagcgttgcggaccgaacgggaacgtctggcggccgagcttgtgcaa
agcgaacaaacccttgctgaacatgcagaaggactcgcaaaggaacaagagctacagacg
cgaggcttgaagcgacagcaggagcttcaacaagagctaaagcaaaatgaagtgcgggca
gatgagcggcgtatgctgcaagaggctgtgcaacggttgcaacagctggaaatcgcgaac
gagcaattgcgtgaagctgaactggagtacgccactcaggagaaacggcttgcgcaagca
gacgaacgtctgaagctgacggaccaggagacacaggagacggaggcacggcgttctgcc
cttgctgcacaggcagctgatggcattgagtcattgctgacgctcgaggcagaaatcacc
gccgatatgtcgtcactggcctccgaggaagagcaactgcgccacgagctccgtgccgag
gagctgggccgtctcgctcagcatctcgctgccgagttgcgcgaaggcgagccgtgcgca
gtgtgcggctcgctgcatcaccccgcgcctgccgtcgtcgcggcgcatagcgcggatgcc
gctgcgccagatgagctgcaccgcctgcggctcggtttgcaggagctgcgccttacactg
cgccagcagttgcacgagcagcgcagcttgctggcgcagcctgccaccgcagacagcggc
gctgctgccacgggcgagcctttcacgcctgcggcagcaccagcagagccgcgcggtgcc
gccgcttgggcggagcgctgcacggcgctggagcgtgctgcggcagagctagccgcacgt
gcgcatacgctgcctgccgaggcacaggcgctgcgcgaggcagacgccgccggacagcag
cggcgtatccgtgctgccgccgagcaggaggcagcagctgcagcgctgacgcaggcacgc
agcaagcgcgaggcatgcaccacgcgcagcgaggggctgcgcgccgaatgggcggcgcag
ctaacggatgtcgctccgagcgaagctgcggagcgttaccgcgccatgcaggagcgcgac
gggcgtgcggaagagctgcggtcccggctggagacgagtgtgaccttcctcgaaggaaag
gcggagcgtgttcaacagatacagcagagtatcatcgaggaggacaaaatcattattgcc
cgccgtacagggctccaaagcaaagatgattcgcttcgtgaaaagttagcacagctccga
aaatgggttggagatggccaagcggcttcattgctggaagaagcgacctcgcgactgcgg
ggacttaaaaacggagccgaagccgcggcacgccgccgtaccgaagcggaagaacgcaag
cagcaagccgttcatgcttcactgattgctcggcaggcctccgactcggcagaagaaaga
cggcagatggcagagtcccgttggggcagccgtctggaagcctcctccttcgctacggaa
gcagaggtcatggaatgctgcctgggaccggaagaagccgcacgctatgagcgtgaagtg
agtttgcatcgagaacgggaaaaagagctgtcttcccgcttaaaacatgtcgaagagcag
ctgaatggagcaacggtaacagaggaacagtgggaaacggccactgcacagctacgtgat
tgccgtgcacgcgacgaagaggcgcttcagaatcgcgccaaggctgagcgtgatttagag
gacttgcagcatcggcacgtccgctggatgaagctggagtccaatcgtatacatttgcgt
agcgaagcggaaaaaatgtccaagctccagtctgtttttcgcggcaatgcctttgttgaa
tatattgccgaggagcagctcatgcaggtcagtcagtcggcttcacgccgcctgcgtttt
ctgaccaagcagcgttacgcgttagaggtagattccagcggtggatttgtcattagtgac
gatgccaacggtggggtcaaacgtccggtatcgaccttgtccggtggcgaaacgttcctg
acctccttgtcgcttgcgcttgcgctgtcggctcaaattcaattgcggggccaataccct
ctgcaatttttctttctggatgaaggctttggaacgttggaccctgagctgcttgacaca
gtgatcacctcactggaaaagctgcaccatgatcaattgtctgttggtgtgattagtcat
gtgcctgaactacgggcccgtcttccgcgcaagctagttgttctgccagcagagcaggct
ggaggcggctcacgtgtggttatggaaactttttga
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