Paenibacillus sp. S02: KAI36_03929
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Entry
KAI36_03929 CDS
T11472
Symbol
rtcB_2
Name
(GenBank) RNA-splicing ligase RtcB
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
pasz Paenibacillus sp. S02
Brite
KEGG Orthology (KO) [BR:
pasz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pasz03016
]
KAI36_03929 (rtcB_2)
Enzymes [BR:
pasz01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
KAI36_03929 (rtcB_2)
Transfer RNA biogenesis [BR:
pasz03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
KAI36_03929 (rtcB_2)
Prokaryotic type
tRNA splicing ligases
KAI36_03929 (rtcB_2)
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GFIT
Other DBs
NCBI-ProteinID:
QYK68776
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Position
4404139..4405596
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AA seq
485 aa
AA seq
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MNIQHTTDSSLHEGTYSHLMKLPAGDLTVYASQQLFSSLDYKVFEMANNNLQIPGIRYMG
YTPDVHVGIGTCIGTTAVWGMENGYVSPSIVGSDIGCGMRVHLTNLHKDALKETKLRRKL
VKTIDKYLPMEAHQRGHYSDIRLEHIVRKGLHGLPNKYIPDSYTPKKSTSLTHVEHSKFS
FDEEVLNLVEDRTWHRAHRQLGTLGGGNHFVEIQAIEIAEENRETAEAWGMFDGQVAVMI
HSGSRAWGGAVSQASSSAIAKTMSRLGLGTSDPRLVFAPLDHPEAAHYVDMMYSALNYAV
VNRHLIAYSVREAFRDVFGTKCELRTLYDLMHNYAWEESHPDHGSVFVHRKGATRALPAG
HPDNPRPYQATGHPALIPGSMGTASYIMVGLPGGQDNFHSICHGAGRIRSRSATKRLVSV
EDFAGALGVGTDDEIVVNQASLESIIDESPQAYKNVDDIIESVTGAGLAAVVAKCKPLAA
LKGAK
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgaatatacaacatacaaccgactcgtccttgcatgaaggaacatacagccatctgatg
aagcttccggcaggtgatctgaccgtatatgcttctcagcaacttttctcctcactggac
tataaggtgttcgagatggctaataacaatttacaaattccaggtatccgctatatggga
tacacaccagatgtacatgtaggcatcggaacctgcatcggtacgacagctgtatgggga
atggagaacggctatgtatctccctccatcgtcggcagcgatattggctgtggcatgcgc
gtacacctgaccaatctgcacaaggatgctttgaaggaaaccaagctgcgccgtaagctg
gtcaaaaccatcgacaaatacctgcctatggaagcccaccagcgcgggcattattcggat
atccgactggagcatattgtacgcaagggtctacacggcttacccaacaaatatattccg
gacagctacactcctaagaaatccacctcactcacccatgtagagcacagtaagttctcc
tttgacgaggaggtgctgaatcttgtcgaagaccgtacatggcatcgggctcaccgacag
ctaggcacactgggtggaggcaatcatttcgtcgaaattcaggcgattgaaatcgcggag
gaaaaccgcgaaacagctgaagcgtggggtatgttcgacggtcaggtggctgtgatgatt
cattctggatcgcgggcttggggtggagcagtcagccaggccagttcatctgctattgcc
aagacgatgagccgtctcggactcggtacctctgacccgagactggtattcgcaccgctg
gaccatcccgaggctgcacattatgtcgatatgatgtattcggcgctaaattatgccgtg
gtgaaccgacatctcatcgcatactcggtgcgtgaagccttccgcgatgtctttggtaca
aagtgcgagttgcgtactttgtacgatctaatgcacaattatgcttgggaggaatcccat
ccggatcacggcagcgtgtttgtgcatcgtaaaggtgctacgcgtgctcttccagcagga
caccccgacaatccgcggccttatcaggcgacagggcatccggccctgatccccggctct
atgggtacagcctcttatattatggtaggtttaccgggcggtcaggataacttccactcc
atttgccatggagcaggccggattcgttcgcgttctgcgaccaaacgactcgtcagtgtg
gaggattttgcaggggccctgggtgtagggacagacgacgaaattgtggtcaatcaggca
tcgctggaaagcattatcgacgaatctccgcaagcctacaaaaatgtagatgatattatc
gaaagtgtcaccggggcaggactcgcagcagttgtagccaaatgcaagccgctagccgcc
ctgaaaggagccaaataa
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