KEGG   Paenibacillus sp. S02: KAI36_04886
Entry
KAI36_04886       CDS       T11472                                 
Symbol
mfd_2
Name
(GenBank) Transcription-repair-coupling factor
  KO
K02240  competence protein ComFA
Organism
pasz  Paenibacillus sp. S02
Brite
KEGG Orthology (KO) [BR:pasz00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pasz02044]
    KAI36_04886 (mfd_2)
Secretion system [BR:pasz02044]
 Type II secretion system
  Competence-related DNA transformation transporter (DNA-T) core components
   KAI36_04886 (mfd_2)
SSDB
Motif
Pfam: Helicase_C DEAD ResIII ComFA_N AAA_30 Cas3-like_C_2
Other DBs
NCBI-ProteinID: QYK69678
LinkDB
Position
complement(5464543..5466657)
AA seq 704 aa
MKIAVYAVKYKGNWTLRLSVDIRVDMTWWMNQDEGQENVVERWVLLGDELPLSWGTKLCE
TFKELADMERWGKRQWWAYILAQLKSELAPEPFDGERILSGVVENICIWDGGQGWTSRTE
SRNEGRETNGGLRSILKRSLVTGIDGLDRECLTRQANELVNLLSGRQLLVPEVEALLAEA
APGLERTWRSAAQLAYLQGRLSFAAGLAPAPRTRWSAARTHELRCNRCGSGIVHRTSCAS
CGRKACAYCETCLALGRSRECSLLLRGAAKPALPHTADTAPATELDRWGLSPAQRAAAEA
ALRFLAAPHGEVRGRFRPEGRGLRALFRRDMVACRGSGAAASQGSPLARSRQSSPKTGEG
ARHIADWQGSTTVAERFLLWAVTGAGKTEMMFPLLQYVLDHGGAALVATPRRDVVLELAP
RLAIAFPDVSMVTLYGGSAERWQRGQLTLATTHQLLRYRQAFDLVVIDEIDAFPYHNDPM
LAFAARAVCKPKGKFIYLSATPPHALQKEAARGLLPHAKVPVRFHRHPLPVPFRLGTASV
QHWLQKGRLPASFIQRLRVSIQRGAQVFLFVTRISHIQGLVELLIKQLPDVPIAGTSSQD
EERTAKVRLFRATEIRVLVTTTILERGVTVPRSDVYVLDADSSLFDEASLVQMAGRAGRS
KDDPCGGVIFTSPQWTRGQKRAIRQIKRMNALARKKGYLKEVKH
NT seq 2115 nt   +upstreamnt  +downstreamnt
gtgaaaattgcagtatatgcagtgaagtataaagggaattggactctccgattatctgtg
gatattcgagtagatatgacatggtggatgaatcaagatgaggggcaagagaatgttgtc
gaaagatgggtgttattaggagatgagcttcccttgtcctgggggacaaagctgtgcgaa
acatttaaggaattagcagatatggagcgatggggaaaacggcagtggtgggcttatatt
ctcgcacagctaaaaagtgaactggctcctgagcctttcgacggagaacggattttatct
ggagtagtagaaaatatatgtatttgggatggtggacaagggtggacttctcgcacagaa
agtaggaatgagggacgagaaacaaacggaggtttacgttctattctaaaaaggagcctc
gtcacgggaattgatggattggatagggagtgtttaacacgacaagcgaatgagttggtt
aatttgttgtcaggacgccagttactcgttccggaagtcgaagcgctactggcagaggca
gcgccaggtttggagcgtacttggcgatccgctgcacagcttgcatatctgcaaggccga
ctcagctttgctgctggcctcgctccagcaccacgtacgcgctggtctgccgcgcgtacg
catgaactccgctgcaaccgttgtggcagcgggatagtgcaccgcacgagctgtgcgtcg
tgcggacgtaaggcgtgcgcttactgcgagacatgtctcgcgctggggcgcagccgtgaa
tgctcgctgctgctgcgcggtgcagcgaaacccgccctgccgcacacagcagacacagcc
ccggcgacggaactcgaccgctgggggttgagccctgcacagcgtgccgccgccgaagcg
gcgctgcgctttttggccgcaccgcacggcgaagtgcggggacgttttcgcccggaaggc
cgtgggctccgggcgttgttccggcgcgacatggttgcgtgccggggatcaggtgctgcc
gcttcgcagggcagcccccttgcccgcagcaggcagtcttcgccaaaaactggcgaaggt
gcgaggcatatcgctgattggcaagggtccactaccgtggcagaacgttttctgctctgg
gccgtaacgggcgcaggcaagacggaaatgatgtttccgctcttgcaatatgtgttggac
cacggcggagcggcgcttgtggcaacaccgcgccgcgacgtggtactggagctagcccct
cgtttggccattgcttttcccgatgtgagtatggtgacgctctatgggggaagcgcagaa
cgctggcaaaggggacagctgacactggcaacgacacatcagctattgcgttatcgtcaa
gcctttgacttggttgtgattgacgagatcgacgcgttcccttatcacaatgatcctatg
cttgcttttgctgcacgagcagtatgtaagccgaagggaaagtttatctatttgtctgct
acaccaccccatgctttgcagaaagaggctgcacgcggtctactgccacacgccaaggtt
cccgttcgttttcatcgtcatcccctacctgtcccatttcgcctggggactgcttcagtg
caacattggctgcaaaaaggtcggctacccgcatcctttattcaacgcctacgcgtatcc
atacaacgtggagcacaggttttcctgtttgtgacacgaatttcacatattcagggactt
gtggagctgctgattaaacaattgcctgatgtacctattgctggaacctcctcacaggat
gaagaaagaaccgctaaagtgcgcttatttcgagctactgaaatacgagttctggttaca
acgactattttggagcgaggggtgactgttccacggagtgacgtgtatgtattagacgcg
gacagcagtctttttgatgaagcctctcttgtccaaatggctggtcgcgcgggaaggtcc
aaggatgatccatgtggaggtgttatttttacatcgccccaatggactcgaggccaaaag
agagcgattagacaaattaaacgaatgaatgcactggctcggaaaaaagggtacctgaag
gaggtgaagcactaa

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