Paenibacillus sp. S02: KAI36_05082
Help
Entry
KAI36_05082 CDS
T11472
Symbol
dinG_3
Name
(GenBank) 3'-5' exonuclease DinG
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
pasz Paenibacillus sp. S02
Pathway
pasz03022
Basal transcription factors
pasz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pasz00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
KAI36_05082 (dinG_3)
09124 Replication and repair
03420 Nucleotide excision repair
KAI36_05082 (dinG_3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pasz03021
]
KAI36_05082 (dinG_3)
03036 Chromosome and associated proteins [BR:
pasz03036
]
KAI36_05082 (dinG_3)
03400 DNA repair and recombination proteins [BR:
pasz03400
]
KAI36_05082 (dinG_3)
Enzymes [BR:
pasz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
KAI36_05082 (dinG_3)
Transcription machinery [BR:
pasz03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
KAI36_05082 (dinG_3)
Chromosome and associated proteins [BR:
pasz03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
KAI36_05082 (dinG_3)
DNA repair and recombination proteins [BR:
pasz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
KAI36_05082 (dinG_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
PDDEXK_1
Helicase_C
PhoH
preSET_CXC
Motif
Other DBs
NCBI-ProteinID:
QYK69874
LinkDB
All DBs
Position
complement(5680063..5682435)
Genome browser
AA seq
790 aa
AA seq
DB search
MTGTGDRMKEPIHISVRPLVEYVHRSGSIHSGFRSNSSMLEGTRVHQVIQKGYKEHDRKE
VHLRTEISYKDELFIIEGRCDGLIELDGVWTVDEIKSISLPLEDIQGDGQPVHWAQAFLY
AYMIAREEQHHFMQVQLTYVQAHSEDIRRFRRELSFAELEAFAQEMIAGYAPYAFLLRAH
AKKRDASIAMLNFPFDTYRSGQRALAGSVYKTIAEGVNLFAKAPTGIGKTVSTLFPAIKA
IGKGQVRRVYYVTARTTTRAAAEEAYARMQAQGLHMHVVTLTAKDKICFKDENDCDAGSC
SMCEGYYDRINGAVSDILANETLMTRAVIEHYARKHKVCPFEFSLDVAYASDGIISDYNY
VFDPRISLKRLLEEHKRKGVVLVDEAHNLVERGRDMFSAEILKSSFLELKREFKLLCPEI
SAAASAVNAHMITLRKQYADTGKAVETAAPQEVLELLAPFVEAAERELVTGGSTSHASGE
GTAYALLLDTYFTAQNMLRIAALYDERYVTYVEAGRSEVRVKLFCLDPSHLLGQAIKGYR
SAIYFSATLTPLAYYRDMLGANEEDYTLQVPSPFHQEQWDVRLLPLSIRYRDRERSKGAI
ADMLAALVVERKGNILVFFPSYPYLREVYEEFMLRDVSANTLVQSPGMTEPERDRFLEAF
QPGQEHTLLGFAVLGGVFAEGVDLPGDRLNGVVVVGVGLPQIGAERDVLRDYFSEQGRNG
FNYAYVYPGMNKVLQAGGRLIRTEHDEGLLVLVDDRFAKEPYASLLPDEWKSYRLTEQAG
LRKEWIDYEL
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgaccggaacgggtgatcgtatgaaggaaccaattcacatatcggtgcgtccacttgtg
gaatatgtgcatcggagcggcagcattcatagcggctttcgctcgaatagcagtatgctc
gaaggaactcgcgtgcatcaggttatccagaaaggttacaaggagcatgaccgcaaagag
gtacatttacgtacagaaatttcgtataaggacgaattgtttatcattgaaggccgctgt
gacggactgattgagctggatggagtatggacggttgatgaaattaaatcgatctctttg
cccctcgaagatattcagggtgacggtcaacccgtacactgggcacaagcatttctgtat
gcctatatgattgcccgtgaggagcaacatcatttcatgcaggtccaacttacttatgta
caggcacacagtgaagacattcgccgattcagacgagaactatcctttgctgagctggaa
gctttcgcacaagagatgattgctggttatgcaccgtatgcattcctgctgagagcacat
gcgaaaaagcgggatgccagcattgctatgttgaactttccctttgatacgtatcgttcg
ggtcagcgagctctcgcgggttcggtgtacaagacgattgccgaaggggttaacctgttt
gccaaagcgcctacaggcattggtaaaacggtatccaccttgtttcctgcgatcaaggct
atcggtaaggggcaggttaggcgagtatattatgtaacggctcgtaccaccactcgggca
gcagccgaagaagcttacgccagaatgcaggcccaagggctgcacatgcatgtggtgact
ttgactgcgaaggataaaatttgctttaaggatgaaaatgattgtgatgctggatcatgc
agcatgtgcgagggctattacgaccggatcaacggtgcggtatccgatattttggcgaat
gagacgttaatgacccgggcggtgattgagcattatgcgcgcaagcataaggtatgtccc
tttgaattttcgctggatgtggcgtatgcctcggatggtataatcagtgattataattat
gttttcgatccacggatttctttgaaaagattgctggaggagcacaagcgaaaaggtgtt
gtactggtggatgaggcgcataatctggtagaacgcggccgggacatgttttcggcggaa
attttgaaatcttcttttttggaactgaaacgagaatttaagttgctatgcccagagatt
tctgcggctgcgagtgcagtgaacgcacatatgattacgctgcgcaagcaatatgcagat
acaggaaaagcagtggagacagcagcaccgcaagaggtgctggagctgttagcgcctttt
gtggaagcagctgaacgtgaactggtgacggggggcagtacaagccacgcaagcggtgag
ggtacggcttatgcattgcttctagatacgtattttaccgctcagaatatgctgcgcatt
gctgctttatatgatgaacggtacgttacttatgtggaagcggggcgcagtgaagtgagg
gtcaagctgttctgcctcgatccttctcacttgctgggacaagctattaagggctaccgc
tcagccatttatttttccgcaacgttgacaccgcttgcttattaccgggacatgctcgga
gcaaacgaggaagattatacgttacaggttccttcccccttccatcaggagcagtgggat
gtacgtctgctgccgctctccatccgttatcgggatcgtgagcgttccaaaggggcgatt
gcggatatgctggctgcattggttgtggaacggaaaggaaatatccttgtatttttcccg
tcctatccatatctgcgtgaggtatatgaggagtttatgcttcgggacgtgtccgcaaat
acgttggtacaaagtccggggatgacggaaccagagcgggatcgatttctagaggctttc
cagcctgggcaagagcacaccttgcttggctttgccgtactgggtggtgtgtttgctgaa
ggtgtcgatttacctggggatcgcttaaatggggtagtggtcgtcggcgtcggcttgcca
caaattggagcagagcgggatgtgctgcgggattatttttccgaacagggacggaatggt
ttcaattatgcgtatgtatatccagggatgaacaaggttcttcaggcaggtggcagactt
attcgcacagagcacgacgaaggattgctggtcctggtagatgatcgttttgccaaggaa
ccgtatgcttctttgctgccagacgaatggaaaagctaccgtctgacggaacaagcggga
ttaaggaaggaatggatagactatgaactttaa
DBGET
integrated database retrieval system
