Paraglaciecola sp. T6c: Patl_0076
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Entry
Patl_0076 CDS
T00372
Name
(GenBank) A/G-specific DNA-adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
pat
Paraglaciecola sp. T6c
Pathway
pat03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Patl_0076
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pat03400
]
Patl_0076
Enzymes [BR:
pat01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
Patl_0076
DNA repair and recombination proteins [BR:
pat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Patl_0076
Prokaryotic type
Patl_0076
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
HHH
EndIII_4Fe-2S
DUF7729
Whib
Opy2
Motif
Other DBs
NCBI-ProteinID:
ABG38608
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All DBs
Position
complement(89226..90290)
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AA seq
354 aa
AA seq
DB search
MQSQSQLTSSFANRILTWFDSHGRKDLPWQQGKTPYSVWVSEIMLQQTQVKTVIPYYQKF
MLRFPDILSLANAPQDEVLHHWTGLGYYARARNLQKAAQVIRDEYGGVFPPDINDVVALP
GIGRSTAGAVLSLACGQHHSILDGNVKRVLARYFAVDGWPGKKDVEQALWQYADSLTPSS
RTGDYTQAMMDMGATICTRSKPKCDNCPLQQSCLAFAQGRQSELPGKKPKKDIPVRTTVM
LIPMWQSQVLIYQRPSTGLWGGLWGFYEADTLEALDKTAQQLGLSDYTRVTLEPFRHTFS
HFHLDIQPVILQLAQPTSLQINEKQQIWYDLLNQPNVGLAAPTKKLLTVCQTQL
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
gtgcaatctcagtctcagctaacatcatcttttgcaaaccgaatattgacttggtttgat
agccatggtcgcaaagacttaccctggcagcaagggaaaaccccttactctgtttgggtg
tcagaaattatgcttcaacaaacccaagtcaaaacggttattccctattatcaaaaattc
atgctgcgcttccctgacattttaagcttggccaatgccccgcaagatgaagtattgcac
cactggacgggtttaggttactacgctcgcgccagaaatttacaaaaagcagcacaagtt
attcgagatgagtatggtggagtttttccgccagacataaacgatgtagtcgctttacca
ggtattggtcgctctactgctggtgcagttctgtcattagcctgcgggcaacatcacagc
atattagatggcaacgtgaagcgggtgttagctcgctattttgcagttgatggttggccg
ggtaaaaaagacgttgaacaagcgctatggcaatacgccgattcgcttaccccaagctca
cgtaccggtgattacacacaagcgatgatggacatgggtgccactatttgcactcgcagt
aaaccaaaatgcgataactgccctttacaacaaagctgtttggctttcgcccaaggtcgc
caaagtgaattacccggcaaaaagcctaaaaaagacattccagtgcgcactactgtcatg
ctcatacctatgtggcagtctcaggtattgatttatcaaagaccctccacaggcttgtgg
ggggggttgtggggattttatgaagccgacacattagaagcactagacaagacggctcag
caactaggactaagcgattatacacgcgttacgcttgagccttttcgccatacattcagc
cattttcatttggatattcagcctgttattttgcaacttgcacaacctacatcattacag
attaatgagaagcagcaaatctggtatgacttactcaatcaacccaatgttggcttagcg
gcccccaccaaaaaattacttacggtatgtcagacccaactttaa
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