Paraglaciecola sp. T6c: Patl_0114
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Entry
Patl_0114 CDS
T00372
Name
(GenBank) transcriptional regulator, LysR family
KO
K21900
LysR family transcriptional regulator, transcriptional activator of the cysJI operon
Organism
pat
Paraglaciecola sp. T6c
Brite
KEGG Orthology (KO) [BR:
pat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pat03000
]
Patl_0114
Transcription factors [BR:
pat03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Patl_0114
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like_2
P22_Cro
MarR_2
HTH_30
PBP_like
SBP_bac_1
MarR
Motif
Other DBs
NCBI-ProteinID:
ABG38646
UniProt:
A0A9J9B6S1
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Position
complement(128929..129813)
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AA seq
294 aa
AA seq
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MNLHALRVFHSVAHLGSFSQAAEALYISQPAVSKALKELEHQLGMQLIERAAKGKKLALT
QGGQSLFNHARSIFAIEQAALEDVRARTGLKQGTLVIGASTTIAGYWLAPYLARFNQQYP
KIKVEVQVANTAQIEQALLACTIDFALVEGSASDPHISSQHWQDDPMSIVYSSSLKPADD
KEKWLSEQRWLLREPGSGTRQMSFSLLAEQGIAVNDSMQLGSNEAIARGVTQGMGVALLP
QVVTEDLLALKKLKVISTQKSKLLSRPLYQLEYRDRPSSPAANAFAQILYQAVN
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgaatttacatgcgcttagggtttttcatagcgttgctcatttgggcagtttctcccaa
gcggctgaggcgctttatattagccaacccgcggtttcaaaagcactcaaagagcttgaa
catcaactgggtatgcaactcattgagcgagcagctaaaggaaagaagttagctttaacc
caaggtgggcagagcttgtttaatcatgcccgcagtatttttgcgattgaacaagcggca
cttgaggacgtaagagcacgcacaggattaaaacaaggcactctggttataggcgccagc
accactatagccggttactggctagcgccttatttagcgcgttttaatcaacaatacccg
aaaattaaagtagaagtgcaagtagccaataccgcgcaaattgaacaggcattactggcc
tgcaccattgactttgcattggtggaagggagtgcaagcgacccacacattagcagccag
cattggcaagacgaccccatgagtattgtgtattcaagctccttgaaacccgcagatgac
aaagaaaaatggctaagcgagcaacgctggttgctgcgggagcctggctcgggcacccgg
caaatgtcattttcgctattggccgaacaaggcatagcagtgaatgacagtatgcaacta
ggcagtaatgaggcgatagctcgtggcgtcactcaaggaatgggagtggcgttattgccc
caagttgtcaccgaagatttacttgcgctgaaaaaattaaaggtaatttctactcaaaaa
agcaagctgttgtctcggcctttgtaccagctagaataccgtgaccggccatcgtcaccg
gcagctaatgcctttgcgcagatcttgtatcaggcagttaactaa
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