Paraglaciecola sp. T6c: Patl_0201
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Entry
Patl_0201 CDS
T00372
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pat
Paraglaciecola sp. T6c
Pathway
pat00071
Fatty acid degradation
pat00280
Valine, leucine and isoleucine degradation
pat00310
Lysine degradation
pat00362
Benzoate degradation
pat00380
Tryptophan metabolism
pat00410
beta-Alanine metabolism
pat00640
Propanoate metabolism
pat00650
Butanoate metabolism
pat00907
Pinene, camphor and geraniol degradation
pat00930
Caprolactam degradation
pat01100
Metabolic pathways
pat01110
Biosynthesis of secondary metabolites
pat01120
Microbial metabolism in diverse environments
pat01200
Carbon metabolism
pat01212
Fatty acid metabolism
Module
pat_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
pat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
Patl_0201
00650 Butanoate metabolism
Patl_0201
09103 Lipid metabolism
00071 Fatty acid degradation
Patl_0201
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Patl_0201
00310 Lysine degradation
Patl_0201
00380 Tryptophan metabolism
Patl_0201
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
Patl_0201
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
Patl_0201
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Patl_0201
00930 Caprolactam degradation
Patl_0201
Enzymes [BR:
pat01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
Patl_0201
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
Patl_0201
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
Patl_0201
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
Patl_0201
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GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
ABG38733
LinkDB
All DBs
Position
240399..242558
Genome browser
AA seq
719 aa
AA seq
DB search
MIYEGKSLNVTLLPNGIAELVFDAQGSVNKFDRQTVSELDEATQALKSQSDVKGVLVRSN
KSTFIVGADITEFTGLFDMPAEEVLTWVAKTSQVFDRFEDLPFPTISAINGFALGGGCEM
TLACDLRVADTTAAIGLPEVKLGLMPGFGGTVRLPRLIGADNALEWMTTGRDRKAAKALA
EGAVDAVVAPEKLRDAALSMLQDAIDGKFGWEARRAQKKAPLKLNKNESMMSFSTAKAMV
FAQAGKHYPAPHAMVDTVANAARLDRAGALELENQGFTKLAKSDAAKAQVGIFLADQLVK
SKGKKQAKASTKDVKQTAVLGAGIMGGGIAYQSAVKGTPVIMKDINQDALDLGLNEAAKI
LGKGMQRGKVTPAVMSNTLNNIVPTLEYSAIKDVDLVIEAVVENPKVKGIVLKETEQNVS
DDTVICSNTSTISINQLAESLEKPERFCGMHFFNPVHKMPLVEIIRGEKTTDATIATVVA
ATLKMGKTPIVVNDCPGFLVNRVLFPYFAGFSKLVMDGADFVAVDKVMEKIFGWPMGPAY
LLDVVGMDTADHASSVMADGIPERMQKIDNDPVTLLYKSERLGQKNGKGFYNFSLDKRGR
PAKKAADEAYELFAPHCADKRDFDADEIIARVMIPMANEAIRCLEEGIVGSAAEADMALL
YGLGFPPFRGGVFRYIETMGLANFVALADKYADLGPIYQISDGVREMAASGKSYFSQSA
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgatatatgaaggcaaaagcctcaacgtaacgctgttgccaaacggcattgcagagctt
gtattcgatgctcaaggttcggtgaataaattcgatcgccaaacggttagcgagcttgac
gaagcgactcaagcccttaaaagtcagtcagatgtaaaaggggtcttggtgcgctcgaat
aagtcgacctttatcgtgggtgctgacattactgaatttactggcttattcgatatgcct
gctgaagaagtattaacttgggtagcgaaaacgtctcaggtgttcgatagattcgaagac
ttacctttcccgacgatttcggctattaatggctttgcgctaggtgggggttgtgaaatg
acgttagcctgtgacctgcgtgttgcagacaccacagcagccattggcttgcctgaagtg
aaattgggccttatgcctggttttggtggcacagtacgtttacctcgcttaatcggcgct
gataatgcgctagagtggatgaccacaggccgtgaccgcaaagcggccaaagcgctagct
gaaggcgcagttgatgccgtagttgcgcctgaaaaattgcgtgacgctgcccttagcatg
ttgcaagacgctatcgacgggaaattcggttgggaagcacgtcgcgcccaaaagaaagcg
cctcttaaactgaacaaaaatgaatccatgatgagcttctcaacagccaaagccatggta
ttcgcccaagcgggtaagcattacccagcacctcatgccatggttgataccgttgctaac
gcagcccgtttagaccgcgctggtgcattagagctggaaaaccaaggattcaccaaacta
gcgaaaagcgatgcagcgaaggcccaagtgggtatcttccttgcggatcagttagtgaaa
agcaaaggtaaaaaacaagccaaagcctcaaccaaagacgttaagcaaacggccgtatta
ggtgcaggtatcatgggcggcggtattgcataccagtcagctgtgaaaggcacgccggtt
atcatgaaagacattaaccaggacgcattggatcttggtttgaatgaagcggcgaaaatt
ttaggtaaaggtatgcagcgcggtaaagtgacccctgctgttatgtccaacactttgaat
aacatcgtaccgacccttgaatactcagcgataaaagacgttgatttggttattgaagcg
gttgttgagaacccgaaagtcaaaggtatagtgcttaaagagacagagcaaaatgtgtct
gatgacacagtgatttgttctaacacttcaacgatttcaattaaccaattagcagagagc
ctagaaaagcctgagcgcttctgcggcatgcacttctttaacccagtgcacaaaatgcca
ttagttgagatcattcgcggtgaaaaaaccactgatgcgaccattgccactgtggttgca
gccaccctgaaaatgggtaaaaccccgattgtggttaacgattgccctggtttcttggta
aaccgagtgttgttcccttacttcgcgggctttagcaaattggttatggacggcgctgac
tttgtagcagtagacaaagtcatggagaaaatcttcggttggcctatgggcccagcttat
ttacttgacgtagtaggcatggacaccgccgatcacgcatcaagcgtcatggccgatggc
attccagagcgtatgcagaaaattgacaacgatccggttaccttgttgtacaaatctgag
cgtttagggcagaaaaacggcaaaggtttctacaacttcagcctagacaagcgcggtcgc
ccagcgaagaaagccgctgatgaagcgtacgaattgtttgcaccacattgcgccgacaag
cgtgacttcgacgcggatgaaatcattgcacgagtcatgatcccaatggcaaacgaagcg
attcgttgtttagaggaaggcatagtaggcagtgcagcagaagctgacatggccttgttg
tacggcttgggcttccctccctttagaggcggggtgttccgttacatcgaaaccatgggc
ttggctaactttgtagctctagccgacaaatacgcggatttaggtccgatttatcagatt
tctgacggcgtgcgcgaaatggccgcttcaggtaaatcttatttttctcaatcagcctaa
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