Paraglaciecola sp. T6c: Patl_0295
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Entry
Patl_0295 CDS
T00372
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
pat
Paraglaciecola sp. T6c
Brite
KEGG Orthology (KO) [BR:
pat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pat02000
]
Patl_0295
Transporters [BR:
pat02000
]
Other transporters
Pores ion channels [TC:
1
]
Patl_0295
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
CarboxypepD_reg
CarbopepD_reg_2
CooC_C
DUF6795
SdrD_B
DUF7382
TTR_TEN1-4
EMC7_beta-sandw
Motif
Other DBs
NCBI-ProteinID:
ABG38827
LinkDB
All DBs
Position
complement(344976..347369)
Genome browser
AA seq
797 aa
AA seq
DB search
MNRISPLAALISVLLPASVLAQTIEGTVVNNDGRAVAGATVEVEGVGIETITDQEGRFTF
TELTQGKNELHISSPGFAHLHQDISVPEQGTRQIEFILQRSPIEVIDVYATPIHMSVMES
ASPVSVLSGETLRRQQASTLGDSLEKLPGVQSNFHGGVASTPIIRGLSGPRVLISQNGLD
VSDVSRVGPDHSVASEASTSQQIEVLRGPATLFYGSGAVGGVVNVVDGRVPSDNTTRGEW
LLETSSVDDKKLGSFNVTTGYESFGFYADGYWRESNDYDVPVAPDADSNEPQEHVVKNSS
EKSDGITLGASYLMDQGYIGVAVEQFNREYGIPGHSHGGEDESVYADLEQTRVQLLGELN
LDNEWLSKINLRGGFTDYEHAEIEEGAVGTLFENETHELKLDFIHTPFADWNGGLSIHYK
NSDVAAQGEEAFTPPSEAQTIALAIMEEKHFGDVLLQFGARIERVTIDANNVLLPTLEAH
AHDDEAEEDEHDHDHEHEEEASVTRVFELDHEFTPVSLSAGLVWDFTPGYNLGLSISRSE
RAPSAAELLSFGAHIGTGTYEVGALFALNDEGSSIGLTSKDIDLETANNIDLTLRKTQGD
IGFVFNAFYNQVDNYYYQTATGLFAESGHDHEHEHEESGVEEDEHADELPVYIFQTDDVI
LHGFEAQIAWQATDEFKATLFSDYVRARLKDGGDLPRTPPLRFGTQFSYQTAHLSAHLDI
TRYQEQDRVSSDETSTSGYTLIDASVSYYLPVFSHDIAVFLKGNNLTDTEARVHTSFLKD
IAPRPGRSISVGIRGNF
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgaataggatatctcctctagcagccctaataagcgtgctattgccagccagtgtttta
gcgcaaaccattgaaggcacagtagttaataatgatggccgagcggttgctggagcaacg
gtagaagtagaaggtgtcggcattgaaactatcaccgaccaagaaggccgttttacgttc
acagagttaacgcaaggtaagaacgagctacatatttcttcaccgggctttgcccatcta
catcaagatatttcggtgccagaacaaggcacgaggcaaatagaatttattctgcagcgc
tcgcctatcgaagtaattgacgtatacgccacacccattcatatgtcggtgatggaatca
gcgtctcctgtgagtgtgttatcaggcgaaaccttgcgccgtcaacaagcctcgacattg
ggtgacagtttagaaaagcttcctggggtgcaatcaaactttcatggaggtgtcgcaagt
acccctatcatccgtggtctaagcggcccccgggtgctgatctcacagaacggtttagac
gtcagtgatgtatcaagagttgggccggaccactcggtagcaagtgaagcgtcgacatct
caacaaattgaagtgctgcgcggtcctgccacattattttacggtagtggtgctgttggt
ggcgtagttaacgtagtcgacggtcgagtacctagtgacaacaccactcgcggcgaatgg
ttactcgaaaccagctcggttgatgataaaaagcttggctcatttaacgtgaccactggc
tatgagtcatttgggttttacgccgatggctattggcgagaatcaaatgattatgacgtt
ccggtggcaccagatgctgactcaaacgagccccaagagcacgtggttaagaacagttca
gaaaaatctgatggcatcaccttaggtgctagctacctaatggaccaaggatacataggt
gtggccgttgagcaatttaaccgcgagtatggcatacccgggcattcgcacggaggcgaa
gacgaaagcgtttacgctgatttagaacaaacccgcgtacagcttttaggtgagttaaac
cttgataacgaatggctcagcaagattaacttacgcggcggttttaccgactatgaacac
gcggaaatagaagaaggcgctgttggcactttattcgaaaacgaaacacatgagctaaag
ctcgactttattcataccccatttgctgattggaacggtgggctcagtattcattacaaa
aacagtgatgttgctgctcaaggcgaagaagcatttacgccgccctcagaagcgcaaacc
attgctttagccatcatggaagaaaaacactttggtgacgtgttattgcaatttggtgcc
cgcattgagcgtgtcactattgatgcaaataacgtgttgttgccaacgcttgaagcgcac
gcccacgacgacgaagctgaagaagatgagcacgatcatgaccacgagcatgaagaagaa
gcctctgtcacacgcgttttcgagctagatcacgaatttactccagtgagcttatccgcg
ggcttagtgtgggactttacaccgggttacaacctaggattgtcaatttcacgctctgaa
cgtgccccttctgcagctgaactgttgtccttcggcgcgcatattggtacgggtacctat
gaagtgggcgcacttttcgccttaaatgacgaaggttcaagtatcggcctcacctcaaaa
gatatcgatcttgaaaccgccaacaatatcgatctcacattacgtaaaacccaaggagac
attgggttcgtattcaacgcgttctacaaccaagtggacaattattactaccaaacagcc
acgggtttgtttgccgaaagcggccacgatcatgaacacgagcatgaagaaagcggtgtc
gaagaagacgagcatgcagacgaattaccggtttatatttttcaaactgatgacgtcatt
ttacatgggtttgaggcacaaatagcctggcaagcaaccgatgaattcaaagcaaccttg
ttctcagattacgtgcgcgcacgtttaaaagacggtggagacttaccccgtacgccacca
ctgcgctttggtacacaatttagttatcaaactgcacatttgagtgcgcatttagatatc
acccgctaccaagaacaagatcgtgtttcatctgacgaaaccagcaccagtggctacacc
ttgatcgatgcgagtgtgtcttattacctacctgtttttagtcacgatattgccgttttt
cttaaaggcaataacctgactgacactgaggccagagttcacacctcattcttaaaagac
attgcaccacgtccgggacgcagcatttctgttggcatcagaggcaacttctag
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