Paraglaciecola sp. T6c: Patl_0489
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Entry
Patl_0489 CDS
T00372
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
pat
Paraglaciecola sp. T6c
Pathway
pat00550
Peptidoglycan biosynthesis
pat01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pat00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Patl_0489
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pat01003
]
Patl_0489
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pat01011
]
Patl_0489
Enzymes [BR:
pat01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
Patl_0489
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Patl_0489
Glycosyltransferases [BR:
pat01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
Patl_0489
Peptidoglycan biosynthesis and degradation proteins [BR:
pat01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
Patl_0489
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transgly
Transpeptidase
UB2H
UvrB_inter
Motif
Other DBs
NCBI-ProteinID:
ABG39019
LinkDB
All DBs
Position
564933..567278
Genome browser
AA seq
781 aa
AA seq
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MKKTAKNKSKSSQSGASSKLRHLHPWAWLKRNWWRLLIILTAVVAAYGVYLDAQIVKQFS
GNKWQVPAQIFARPMHFELKQEITTQEIVEELELLGYRKVRHADDTGEYQLKASGVRIQR
RAFHFPHGKESEVALDITLANGRVASLRNLDNNQALNDVYLEPWLVTRLMSSGREDRMLV
NLDGVPQSLIKALVLVEDKDFYKHYGIAPLSILRALIANVSAGRAVQGGSTLTQQLVKNL
FLTNEKSLVRKAKEALMALIIDARYSKDEIIEAYLNEVFLGQNGNTGVHGFGLASLFYFD
RPIAELNVAEIATLVGIIKGPSYYNPRRHPERVIERRNLVLRILFENNELQRNEYEYAIN
QPLNLATGASLTSGKHPAFMSMVRRELKTVLSDPNMRESGLKVFTTLDSVAQRKAEQALK
VGVKAQQKRMKLTALQAAMVVTDIKSGEVRSIVGDVNPQFQGFNRALDAKRAIGSLIKPA
IYLTALERAAQYNLATPLKDEPISLKSTYGKMWEPKNADKKFRGQVSLVEALTQSLNVPT
VNLGMEVGLDDIAATVERLGVNEPMDIYPAMTLGAVNLSPIQVNQMYQTIANNGRFIPLH
AVTAVLSPKNKPLWRFSARGEQRADHKATYLLNYALHKVTREGTARQIKQTFGDINMAGK
TGTTDDYRDSWFSGFDNNILVTSWMGKDNNEPINLSGASGAMQLFIGYQKLQQPKSFVRR
YPKGLGIAHFEEQSGALSRPGCANTISVPAILDALPPVPKTCNGEVRGPLKKSLWERLFG
N
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaccgctaaaaataagtctaaatccagccagtcaggggcatcatccaagctc
aggcatttacacccttgggcgtggcttaagcgcaattggtggcgcttactcattattttg
accgccgttgtagctgcatacggagtgtatttagacgcacaaattgtgaagcaatttagt
ggtaataaatggcaggtgcctgctcaaatttttgcgcgcccgatgcattttgagcttaaa
caagagataacgactcaagagatagttgaggaactagaactacttggttatcgcaaagta
cgccacgcagacgataccggagaatatcaattaaaggcctcaggggtacgtattcaacgt
cgtgcttttcattttcctcatggcaaagaatctgaagtcgcactggacataacactggcc
aatggccgggttgcaagcttacgcaatttagataataaccaagccttaaatgacgtttac
ttggagccttggcttgtgactcgcctaatgagcagtgggcgagaagatcgcatgttggtc
aatttagacggcgtaccgcagtcccttatcaaggcgttggtgttggttgaagataaagac
ttttacaaacattatggtattgcaccgctttctatattacgcgcacttattgccaatgta
tccgcagggcgagcggttcaaggcggcagcactttgacccagcaattggttaaaaatctg
tttttaaccaatgaaaagtcactggtacgcaaagctaaagaagcattaatggcgttgatt
atcgacgcacgttacagcaaagatgaaattatcgaagcgtatctcaatgaagtttttctc
ggtcaaaatggcaacacaggtgtacatggttttggtttagccagcttgttttatttcgac
cgtccgattgctgaattaaacgtagcggaaatagcgaccttggttggtatcataaaaggg
ccgtcttattacaatccaagacgtcatcctgagcgagtcattgagcgtagaaatttggta
ctgcgtatcctatttgaaaacaacgaactgcaaagaaacgaatacgaatacgctattaat
caacctcttaatttggcaaccggggcaagtttaacctctggaaagcaccctgcctttatg
agcatggtgcgcagagaattaaaaacggttttgtcggacccaaacatgcgagagtctggt
ctgaaagtcttcacgaccttggactctgtggcccagagaaaagccgaacaagccctaaaa
gtgggagtgaaagcccagcaaaagcgtatgaaactgaccgctttgcaagcagctatggtg
gtaacggatattaaaagcggtgaagtacgctccatcgtcggtgacgttaatccgcaattt
caaggctttaatcgggcactcgacgccaaaagagctatcggttcactgataaaacctgcc
atttacttgaccgcattagagcgtgcggcgcaatataatttggcgactccgttaaaagac
gaacccattagcttaaaaagtacctatggaaaaatgtgggagccgaaaaacgccgataaa
aaattccgcggtcaagtcagtttagtggaagcgttaacacaatccttgaatgttccaacg
gtaaacttgggcatggaagtcgggctagacgatattgctgccaccgtggagcgtttaggc
gtgaacgagccgatggatatctatccagcaatgacgttaggggcggtgaatttatctcct
attcaagtcaatcagatgtatcaaaccatcgcaaacaatgggcgattcattcctttgcac
gcggtaacggccgttttatctccgaagaacaagccattatggcgttttagtgcaagaggg
gagcagcgagcagatcataaagccacttacttattaaactacgcactacacaaagtgacg
cgtgaagggacggcaagacagataaaacaaaccttcggcgatatcaatatggcaggtaaa
accggcaccacagatgattatcgtgacagttggttcagcggatttgataataatatttta
gtaaccagttggatggggaaagacaacaacgaacctattaatttgagcggtgccagtggt
gctatgcagttatttattggttaccagaagctgcagcaacctaagtcattcgtcaggcgc
tatcctaaagggttgggtattgcccattttgaagagcaaagcggtgcgcttagccgccca
ggttgtgctaataccattagtgttccggcgattttggacgcccttcctcctgtgccaaaa
acctgtaacggggaagtacgaggcccactcaagaaatcactatgggaaaggctgttcggt
aactaa
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