Paraglaciecola sp. T6c: Patl_0732
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Entry
Patl_0732 CDS
T00372
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pat
Paraglaciecola sp. T6c
Pathway
pat03420
Nucleotide excision repair
pat03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Patl_0732
03430 Mismatch repair
Patl_0732
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pat03400
]
Patl_0732
Enzymes [BR:
pat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Patl_0732
DNA repair and recombination proteins [BR:
pat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Patl_0732
MMR (mismatch excision repair)
Other MMR factors
Patl_0732
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
Viral_helicase1
AAA_12
AAA_30
AAA_11
ResIII
Motif
Other DBs
NCBI-ProteinID:
ABG39260
UniProt:
A0A9J9B7R3
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All DBs
Position
830725..833514
Genome browser
AA seq
929 aa
AA seq
DB search
MTRNDKNLMFSDIENNLWSNKFALKNNSHVDTDLNAVYQSFINNGTLSYKDEPKSLVKLL
QDPKHAKYQSKLLSRYFEEPEKYLKLDCDYLSIQVDCSQAKTVELFTNNDTGLLKPRSNA
LREILTIRHEPWVHKANNGLMSKENSEGERYPKAPIFTSVYRIKLFNDRRKFFYIYIADG
TKGLEGKRVQIDFIPSRFTDLELSILFGHIKSVLKKRAYSQFIAKARYKRVDIAFNMPGV
FQPFVFPAYFAINSISTGSCWPLEKLVETCYIGNRRSNHYIVYDKILKEMKTDITFFLIE
HAEVQQAMKKLAMVTRIERRFYTNRAGHNSKLFQKTIPLSDLPTQTMPLDEIAIIDPIVM
RKIDRKLLLKTIQEKSRWQDGGNKEAATRQINEELEGTKVFRLDETVFNTMKTKLLTDLL
ETIQNPTIIKTDELIKLIKFNHLKKSIELPLPLTKVKKISKAYKSEHHNIVVKSGAGCGK
TREIVKRVVWLISEKDVDANKITILAYTNDAVKELKQRIRKKLEKLKPLNGKDRFELPNI
KTFSAWCGQQLKRHDKKQYGSSTYMPSEKEKGALTKTREYYLRNIVASNSTIKGKAEDYD
RLFSFSANDCKPNLGNLIDSISSRRSKKLKVNAKDARTVYVAYKKLKEKHSLWDFDDVLT
FMNKRMKVPKFSNKVSDGCEHLILDEMQDSNLVQWQILEKLSAAGIKLFCVGDTAQSIFG
FRGARPARFENYAENTEVKRFTSRHSYRSTSRILRLTNFVRRYTQSLPKKLTTGKSEGDA
PELIEHDDLQGLVNDLTSKLTQLLERSHKTEAILILARTTKVVDTISDAITLALKTEKYM
PLLKRISVMTMHKAKGLEADVCFVVDPRYSRSSYDTKDEYLRLIYVALTRARTKLIICRK
NTSVNFYTDGQEGEPDIIDILKENTFLFA
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgacaaggaatgataaaaatttgatgttttcagatattgaaaataacctgtggagtaac
aaatttgcactcaaaaataacagtcatgtagatactgacttgaatgctgtttatcaatcg
tttattaataacggaacactaagctataaagatgaaccaaaatcgttagtgaagttgcta
caggatccaaagcacgcaaagtaccaatctaagttgttgagtagatattttgaagagcca
gaaaaatatctaaaacttgattgtgattatctatctattcaagtggattgctctcaagct
aaaactgttgaactatttacaaataacgatactgggctactaaagccgagatccaatgca
ctacgtgagattttaacaatccgccatgagccatgggttcataaagcgaataacggtctt
atgagtaaggaaaatagtgagggtgagcgatatccaaaagctccgatttttacatctgtt
tatcgaataaaactattcaatgatagacgcaagtttttctatatctatatcgctgatggg
actaagggtctagaaggtaaaagagtccagattgattttattccaagtcgattcacagac
cttgaactcagtatcctattcggacacatcaagtcagtactgaaaaaaagagcctactca
cagtttattgcaaaagcgagatacaagagggttgatatagcttttaacatgccaggtgta
tttcaaccgttcgtgtttcctgcatactttgctatcaatagtatttcgacgggctcctgc
tggcctttggaaaagcttgttgaaacatgctacataggtaataggagaagcaatcactac
atcgtgtacgataaaatattaaaggagatgaagacagacattaccttttttttgattgaa
catgctgaagtacaacaggctatgaaaaagctagcaatggtcactcgcatcgaaagacgt
ttctatacaaaccgtgcaggtcacaatagcaagttgtttcagaaaaccatcccgctatcg
gacctacctactcagacaatgccactggatgaaattgcaataatagatccaattgtaatg
cgaaaaattgatagaaagcttcttttaaaaactattcaagagaaaagtcgttggcaggat
ggcggtaataaagaagcagctactcgccaaataaatgaagagcttgaagggaccaaggtg
tttcggctagatgaaacagtgttcaatacaatgaaaacaaagctgctaaccgatttattg
gagactatccaaaaccctactattataaagacagatgaacttattaaattaataaaattc
aatcacttaaagaaaagtatcgaattaccactaccgttaacaaaagttaaaaaaatttca
aaagcttataaatcagagcaccacaacatagtagtgaagtctggtgctggttgcggtaag
acgagagaaatagtaaagcgagtagtttggctcataagtgagaaagacgttgatgctaat
aaaattactatactggcttacacaaatgatgcggtaaaagagcttaaacagcgaataaga
aaaaaactcgaaaagctaaagccgctaaacggaaaagaccgttttgaacttccaaatatc
aagacatttagtgcttggtgtggtcagcaattgaaacgacacgataaaaagcaatatggc
tcaagtacttatatgccgtcagagaaagaaaaaggcgctttaactaagaccagagaatac
tatttgcgtaacatagttgcttctaattcgacgattaaaggcaaagcagaagattatgat
agattgttctcatttagtgctaatgattgtaagccaaatcttggtaacctaattgattct
attagctcaagacgttctaaaaagttaaaggttaacgctaaagatgcacgaaccgtttac
gtcgcctataagaaattgaaagaaaaacattctctatgggatttcgatgatgttttgact
tttatgaacaagcgcatgaaagttccaaaattctccaacaaagtatctgatggttgcgag
catctaattttagatgaaatgcaagactccaatttggtgcagtggcagatcctcgagaag
ctatcagcagcaggcataaagttattttgtgttggagatacagctcaatcgatatttgga
tttagaggtgctcgtccggctaggtttgaaaattatgcagagaacacagaagttaagcgc
tttacctcaagacatagctataggtctaccagtcgaattcttcgactcactaactttgtc
cgacgttacactcaatcgttaccaaaaaaactaacaaccggaaaatcagaaggagatgca
ccggaacttatcgagcatgatgatttgcaaggacttgttaatgacttaacaagtaagttg
actcagttgttagaaagatcgcacaagacagaggcaatactcattttagctaggacaact
aaggtagttgatacgataagcgatgcaattactttggcgcttaaaaccgaaaagtatatg
ccactgttgaaaagaatttctgtaatgacgatgcataaagcgaaaggactagaagccgat
gtttgttttgtggtcgatcctcgctattctcgctcatcatacgacaccaaagatgagtat
ctaaggcttatatatgttgctctgactcgagcgcgcacaaaacttataatttgtcgcaaa
aacacctcagtcaatttttatacagatggtcaggaaggtgaaccggatatcattgatatt
ctgaaagagaatacgtttttgtttgcgtaa
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