Paraglaciecola sp. T6c: Patl_0767
Help
Entry
Patl_0767 CDS
T00372
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
pat
Paraglaciecola sp. T6c
Brite
KEGG Orthology (KO) [BR:
pat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pat02000
]
Patl_0767
Transporters [BR:
pat02000
]
Other transporters
Pores ion channels [TC:
1
]
Patl_0767
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
ABG39295
LinkDB
All DBs
Position
875474..878125
Genome browser
AA seq
883 aa
AA seq
DB search
MRMKISKLSCAVVAALATTPVYAQQEAAKTGKASIETIEVTATKRSESIQDIPVSVTALN
GEALENLGVDNFQEYVEFLPNVTFQGTGPGQNEIYIRGAATTQSNISVSSVQALQPSVAF
YLDEQPVSMQGRNLDIYATDMQRIEVLPGPQGTLFGASSQSGTVRLITKKPDHTGFAAGV
DTSTSFTKGGEMSNSVEGFINFAVSDDLAFRVAAYTDNQGGWIDNIRNDPANGGYIGSAV
VIDRISGGVLSDPENTPVISPENDALVEDDFNDAVYSGARFGLSYIINEDWDLLVQHTQQ
TLSTEGVFAYDPNLERETSTNRFVPEDNDDEFGLTTWTLEGRLDKLDIVYTGGYLDRSID
STIDYTGYTNGGLFSAYYVCNYGGDVAPEDEICLDPTKYYKEKTDSTRMTHELRFNTPTD
NVWRLTAGVFYDEQDLNSVGKFNIANTDKFDDLARTLVGSEGVNSTSQPFEPSISFVNDI
QHAIDQIAVFGQIEYDLTDDITATFGARWYEIQDTYKGSTTTVDVSRRLRAFGTQDPAEL
AASGLDDGVIAAIESGQLEVDLLDGDGTLTVDDVILKASVDWKVNEDILVFATYSEGFRP
PVTNRVGGGLATNQTGAFEDFRIPVYSTTDELDNYEFGIKGDFLDGILRVNATAYYSEIS
DLQTSRYDPTNISFLVFTDNVGDAEIRGLDADLTWLATDNLVINAAFSVLDTELTSINAA
LDGIAPPVGSKLPYSADFSGNIRAQYFYELDNGFTGYINGSISYTGDRLASMSMDAYALE
DAAQLVYGAGTGLSIEREAAVYEGVTFADSNGETIQGGRYIQDSYILANLAFGITNDEWK
AEIFIDNLTDESAILYIDAQQYTPKIVSNRPRTVGLRLSYDFF
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgagaatgaaaatatccaagttaagctgcgcggtcgttgccgcacttgctactacgccc
gtctatgctcagcaagaagccgcaaaaacaggcaaagcgagtattgagactattgaagta
actgcaacaaaacgctcagagtcgattcaagacattcccgtgtcagtgaccgcactaaac
ggtgaagcattagagaaccttggggttgataattttcaagaatacgtcgagttcttgcct
aatgtgacctttcagggtacaggccctggacaaaacgaaatttacattcgtggcgcagca
acgacccaaagtaatatctctgtttcatctgtgcaggcacttcagccttctgtcgcgttt
tacctggacgaacaaccggtttcaatgcagggccgtaatctagatatttacgctaccgat
atgcagcgcattgaggtactacctgggccacaagggaccttgtttggtgccagctcacaa
tcaggcaccgtaagattgatcaccaaaaaacctgatcacactggatttgctgcaggggtt
gataccagcaccagtttcactaaaggtggtgaaatgagtaattctgtagaagggtttata
aacttcgcagtatcagacgaccttgcctttcgcgtagcggcctacactgataaccaaggc
ggttggattgataacatccgcaacgatccagcgaatggcggatacatcggtagcgcagtg
gttatcgacagaatctctggcggtgtgcttagcgaccctgaaaatactccggtgatttca
cctgaaaacgatgcgttagtggaagatgactttaacgatgcggtttattcaggtgcgcgt
tttggtctgtcttacattattaatgaagattgggacttattggttcaacacactcagcaa
acattgagcactgaaggcgtgtttgcatacgatcctaatttagaaagggaaacctcaact
aaccgctttgtacctgaagacaatgatgacgagtttggtttgactacttggaccttagaa
gggcgtttagacaaactagacatcgtttacactgggggatacttagaccgctcaatcgac
tcaaccattgattacacgggttataccaacggcggtttattctctgcttattatgtgtgt
aattatggtggagatgttgcgccagaagatgagatttgcttagacccaactaagtattac
aaggaaaaaaccgacagcacgcgtatgacccacgagttgcgctttaatacgccaacagac
aatgtatggcgtctaactgctggtgtattttacgatgagcaagacctcaattcagtgggt
aagtttaatatcgctaatacggacaagttcgacgatttagcccgaactttggtaggctct
gagggggttaactcaacgagtcaaccctttgagccgagcatcagtttcgtaaacgatatt
cagcatgcaattgaccaaatcgcagtgtttggccaaatagaatacgacctgaccgacgac
attaccgcaacgtttggtgctcgctggtatgaaattcaagatacgtataaaggctccacc
accactgttgatgtgagtcgccgtttgcgtgcgttcggtacgcaagatccagctgaattg
gcggcatctggtttagatgatggtgtgatagccgcgatagaaagcgggcaacttgaagtt
gatttactcgatggtgatggcacattgaccgtagacgatgtgattttgaaagcgtcagtt
gactggaaggtaaacgaagatattctggtattcgccacctattctgaaggcttccgtccg
cctgtaaccaaccgcgtaggtggtggtttagcgaccaatcaaacaggggcgtttgaagat
ttccgtattccagtatattcaacaacggatgagttagataactatgagttcggtatcaaa
ggtgacttcctagacggtattttacgtgttaatgctacggcgtactattctgaaatcagt
gacctacaaacctcacgttatgacccaaccaacatcagcttcttggtattcactgacaat
gttggtgacgctgaaattcgcggtcttgatgctgacttaacctggttggccactgacaac
cttgttatcaacgcggcgtttagtgtgttagacactgagttgacgagcattaacgctgca
ctagatggaatagcgccacctgtgggcagtaaactaccgtattctgctgatttctcgggc
aatatccgtgcacaatacttttatgagttagacaatggctttactggatatatcaacggc
tcaattagctacacaggtgatcgcttagcgagcatgtcgatggacgcctatgctcttgaa
gatgctgcacagctcgtttatggcgcagggacaggcctaagcattgagcgtgaagccgct
gtgtacgaaggcgtaacgtttgctgattcaaacggtgagaccattcaaggtgggcgttac
atccaagacagctacatacttgctaaccttgcatttggtattactaacgatgaatggaaa
gctgagatctttattgataacctaacggatgagagtgctatcttgtatattgatgcccag
caatacacgcctaaaatagtgtctaacagaccacgtaccgtagggttaagattgtcttac
gacttcttctga
DBGET
integrated database retrieval system