Paraglaciecola sp. T6c: Patl_0832
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Entry
Patl_0832 CDS
T00372
Name
(GenBank) glycoside hydrolase family 2, sugar binding protein
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
pat
Paraglaciecola sp. T6c
Pathway
pat00052
Galactose metabolism
pat00511
Other glycan degradation
pat00600
Sphingolipid metabolism
pat01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
Patl_0832
09103 Lipid metabolism
00600 Sphingolipid metabolism
Patl_0832
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
Patl_0832
Enzymes [BR:
pat01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
Patl_0832
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Glyco_hydro_2
DUF4982
Glyco_hydro_2_N
Glyco_hydro2_C5
BetaGal_ABD2
Glyco_hydro_2_N2
BetaGal_gal-bd
YidC_periplas
Motif
Other DBs
NCBI-ProteinID:
ABG39360
LinkDB
All DBs
Position
976664..979603
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AA seq
979 aa
AA seq
DB search
MSLRLLFLCLVCSFALNVNGQIKTVETTSVSSRENINIGWRYHKGETARPPSSKQWSAED
WQEVNLPHSYALTSINLDNSDDDKSQQTFHRDISFYERALTIKGNQGSKVYLEFEGAHQK
TRLWVNGQYVGEHAVGAYTPFHFDISEFVTLGQTNTLTLELDNRRNKQIPPDGHTTDYVL
FGGLYRDVYLNVLDPLHFTFDWDSSTSGIFVTTPTVTKRDATVTVRSEVVNTGDSPRKFF
VQTYIVDHQAIIIQRKRTAHTLGSGATHLVKHTSGIDQNLRLWSPDSPYLYKVISQVLDE
EGRVLHSKTNPLGIRKFELVLDKGLVLNGEPIDIIGANRHQHFPYIGDAVPNNLHRLDAL
KFKRSGMNLVRLAHYPHDNAFLQACDELGLIVVEEPPTWIGMGDKLWMARLEEATRRMIR
NHRNHPSVLGWGAGINHRGTIKRLHYAVKEEDPTRISMNNGTLWTGEQHSGITDLYAVMD
YRGAKRQSDDLLFAMEHSGSTDSLSLQEIVSRYKGDPNLIGLASWSAHDSQSFIKRDEQY
PNLSVWQASSSDAFRLPKPNYYWYQSELTSEPMVHIADTRGQFDDQVQVFTNAAEVELLH
NDRSLGRYQAKRTEQNKYLNSPSILIPFKWQSGTLTAIAYQNDGELVVAKHQRAKGTQPA
KLDVVFDTAGFDMTADGSSIILAYAKITDNQGGLIDKDTPKVRFELQGDGQIIGDETIGA
NPVAWRNGHAPIMIQVGSTASVLTLSAYADGLQTGSASVALNEVSQTHSKNDSSRVLDPL
ALYVDFGNQEQHPQENFYIWSHQSGDDSRVVTAANGQKVTIALSGSTEPLTWDNTWGVPG
DLSFLIEDGVNNAKGQPIKLHFGQLPQGQYVLQTWHHMLSDDGDAIRPLNFSMPNNTDAQ
SVDGYRPTFGKRIAITEAGGGERGDGGSNKGAAGFARHTFTVNEGGEATLLMAAPDGNQQ
IRLNGFGLTQLVPGATNGY
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgcgtctcctttttttatgcctagtttgtagtttcgctttaaatgtaaatgga
caaattaaaaccgttgaaacgacttctgttagctcgcgagagaatataaacattggttgg
cgctatcacaaaggggagacggcgcgcccaccaagcagcaagcaatggtctgctgaagac
tggcaagaggtcaaccttccgcacagttatgccctgacttcgattaacttagataacagc
gacgatgataagtcacagcaaacatttcatcgcgatattagcttttatgagcgagcgcta
accatcaaaggaaaccaaggcagtaaggtctatctcgaatttgaaggggcacatcagaaa
acccgtttgtgggttaatgggcaatatgtgggtgaacatgcggtaggcgcctacacacca
tttcattttgatatatctgaatttgttaccttgggtcaaacaaatactcttacccttgag
ttagataatcgacgtaataaacagattccgcctgatggccatacgactgattacgtgctg
tttggtggcctttaccgagatgtttatttaaatgtattagaccctctgcattttactttc
gattgggactcaagcacctcagggatttttgtcaccaccccgacagtaacaaaaagggat
gcgacggtcaccgtacgaagcgaggtggtcaatacaggagatagcccgcgtaagttcttt
gtgcaaacctatattgttgaccatcaggcaatcatcattcaaagaaagcgtacagcacat
accctaggttcgggggccacgcatttggtaaaacacaccagcggcatcgaccaaaactta
cgtctttggtcaccagacagtccctacttatataaggtgatcagtcaggtacttgatgaa
gaaggaagggtactgcacagcaaaacgaatcctctggggatccgcaaatttgagctagtg
ctagataaaggtctcgtgctcaacggtgaacccattgacattatcggagcgaatcgtcat
cagcatttcccctatataggggatgcagtgccaaataatctgcatcgtttggacgcgtta
aaattcaagcgctcgggtatgaatttagtgcgcttggcccattacccccacgataatgca
tttttgcaagcatgcgatgagctcggattaatcgtggtcgaagagcctcctacatggata
ggtatgggagataaactgtggatggcacgattagaagaggccacacgtcgaatgatacga
aatcaccgaaatcacccgtcagtgttaggctggggagcgggtatcaaccacagaggtaca
atcaagcgcctacattatgccgttaaagaagaagaccctacgcgcatcagcatgaacaat
ggcaccttatggacaggggagcaacactcgggtattacagacttatatgcagtaatggat
taccgtggagcgaagcgccaatcggacgatctactctttgccatggagcactcgggctcc
actgatagtctttcgctgcaagagatagtatctcgttacaaaggggacccaaacctaatc
gggttagcctcttggagcgcccatgacagccaatcttttataaaacgcgatgagcaatat
ccaaatttatctgtgtggcaagcgtcaagctcggatgcattccgtttacccaaaccgaat
tactattggtatcaatcagagcttacctctgagcctatggtacatattgctgacacgcgt
ggtcagtttgacgatcaggtgcaggtgttcaccaatgccgcagaagtggagttattgcat
aacgatcgctcattaggtcgttatcaagccaagcgtacagagcaaaacaagtatcttaat
tcaccttctattttaatcccgtttaagtggcaaagcggcacattaactgccattgcctac
caaaacgacggcgaactcgttgtggcgaagcaccaaagagccaagggtactcaacctgcc
aaactagatgtagtgttcgataccgcagggtttgacatgacagcagatggctcaagtatc
attcttgcctacgcaaaaatcaccgacaatcagggaggcttgattgacaaggatacccct
aaggttaggtttgaactgcaaggggacggccagatcattggtgatgaaaccattggtgct
aatcctgttgcttggcgtaatggccacgcacccataatgattcaagtcggctccacggcc
agcgttttaacattgagcgcttatgccgacggtttgcaaaccggcagtgctagcgtggcg
ctaaatgaagtaagccaaacacactcaaagaacgattcaagccgtgtacttgacccctta
gcgctgtatgtcgactttggtaatcaagaacaacacccgcaagaaaacttttacatctgg
tctcatcaatcaggtgatgactctcgcgtcgtgacagccgccaatgggcaaaaggtaaca
atagcgttatcggggtcaacggagccacttacgtgggataacacatggggagtgcctggt
gatctgagctttctaatcgaagatggggtaaataacgccaaggggcaacccattaagctg
cactttggtcagttacctcaagggcaatatgtgctgcaaacttggcatcacatgctaagc
gatgacggtgatgccattcgccccctgaattttagcatgcccaataacactgatgcccaa
agcgtagatggttatcgccccacatttggtaagcgtatcgctattacagaagctggaggc
ggagaaagaggtgacggtggttcaaataaaggggctgcagggttcgcacgacacaccttt
acggtaaacgagggaggtgaagcaacgttgctcatggccgctcctgatggcaatcagcaa
atacgtcttaacggttttggtcttactcaattagttccaggagctaccaatgggtattaa
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