Paraglaciecola sp. T6c: Patl_0935
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Entry
Patl_0935 CDS
T00372
Name
(GenBank) TonB-dependent receptor, plug
KO
K02014
iron complex outermembrane recepter protein
Organism
pat
Paraglaciecola sp. T6c
Brite
KEGG Orthology (KO) [BR:
pat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pat02000
]
Patl_0935
Transporters [BR:
pat02000
]
Other transporters
Pores ion channels [TC:
1
]
Patl_0935
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
STN
FG-GAP
Motif
Other DBs
NCBI-ProteinID:
ABG39461
LinkDB
All DBs
Position
complement(1115027..1117912)
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AA seq
961 aa
AA seq
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MENGAVQPEFGKTLIRKILNFVAFTLLVYKSAFALATEDLTEQKITTVYFDIPEKSAGDG
LRSFAQATNLALIFPQALVTSVTTNELRGHFSVEAGLLALLAGTGLKGTIYANSTIFVES
SADDPRSLNSSRKVDNMKKATLTKKTKSSTSNKNAQAGLSSPSSSIENIVVTGVRGNPRT
VVKSPIPIDVFTAEQLEQQGQAGLFEALRFLVPSLNLPQRSGGGTGTIIASAGLRGLNPD
QTLVLVNGKRRHKTALINTSTGLFSGSAGVDLNMLPTSAIKRIEVLRDGASAQYGSDAIA
GVINVILKDKPKKGRAVFSSGENFDRSDGENISLGINNGFTLGESGFINLSYDYKESKLS
NRAHTLALPEDGGRNLFALLEDGSFDPRESGLDRMVTKNFGNFPQATNIFGVNAKASLQD
MQLYGFASYAHRKSDLTFTYRLPGDIRNIIDIFPLGFRPEEQIKENDFELVAGITSTKAE
FDWDFSMSYGFDDTTWNNTNGLNASLGLNSPTSFFLGNMNSDEMIIQLDTTRSLVIENSD
LQFSFGLQYRREGFEILKGEYLSYADGNNGLEPGAQGYPGFSPEAESNVSRNNINGYLDL
AWDVSETLFLASALRYEKFSDSAGDEILWKVNLRYELSDSVAFRSSVNTGFRAPSIQQIG
FRGSRGQFTDLDNDGFAEIIVLRKTLPATNPAAKALGATPLAPETSVNVSAGISYTPRET
ISFTMDFYQIDVDDRIAQSSQFNRGDKRLALSGGTIGNEISALLDEAGFDASLGALNYFT
NAIDTRSRGVDIVATWSPKMVMGHLILSGAYNYNKVDVVNSLDNPQELSGLVLADGSQIA
QFDRERLGTYTDAVPDSKLSISANYGLDKWLINVRATRFGQWTVKGITENLDTKNQAKWI
VNLEAGYQLENGLAFFAGANNILNVYPKERSANSLGTNFYDTYSPYGFTGGSWYIRTSYV
W
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaatggtgctgttcaacctgaatttggaaaaacattgattcgaaagatactaaac
tttgttgcatttacattgctcgtatacaaatcagctttcgctctagcgacggaagatttg
acagaacaaaaaataacgactgtgtattttgacattcctgaaaaatctgccggagatggg
ttaagaagttttgctcaagcgactaacttagctttaatttttcctcaagcacttgtgacc
tcagtgactacaaatgaactacggggtcatttttcagttgaagctggtcttctcgcgtta
ctagctgggacgggcctcaaagggaccatttacgctaactctacaatttttgttgaatca
agcgctgatgatccgagaagtctcaacagctcgcgcaaagtagataacatgaaaaaagca
acattaacgaaaaaaacaaagtctagtacttcgaataagaatgcccaagcggggctctct
tcaccttcatcctctatagaaaatatagtggtgacaggagtacggggaaaccctagaaca
gttgtcaaaagccctatacccattgatgttttcactgctgaacaacttgaacagcaaggt
caagcaggactctttgaggcgttgcgctttcttgttccatcactaaatttaccgcaacgt
tcaggagggggcacgggaacgattatagcttcagcaggcttaagaggcttaaatccagat
caaacactggtattagttaatggcaagaggcgccacaagaccgcattaatcaataccagc
actggcttatttagtggttcagctggagtcgacttgaatatgctccctacctccgcaata
aagcgtattgaagtgctgcgggatggtgcatcagctcaatatggctccgatgctatcgct
ggggtaattaatgttattttgaaggataaacctaaaaagggtagagctgtctttagctcc
ggagagaacttcgatcgcagtgatggagaaaatatcagtctaggtataaacaatggcttt
actctaggtgaaagtggttttatcaacttatcctacgattataaagaaagtaaattatct
aatcgtgcccacacgctggctttgccagaagatggaggacgaaacttatttgccctttta
gaagacggaagctttgatcctagagaaagcggtcttgatcgtatggtgaccaaaaatttt
ggtaacttcccgcaagcgacaaatatttttggggttaatgctaaagcgagccttcaagac
atgcagctttatggtttcgcgtcttacgctcatcgaaaatcagatctaacatttacttac
cgacttcctggcgacatacgtaatattatcgatattttccctttaggttttcgtccagaa
gagcaaataaaagaaaatgacttcgaactagtcgctggtattacaagtaccaaggctgag
ttcgattgggatttttcaatgagctacggttttgatgatactacttggaataataccaac
ggtctgaatgccagtttaggcttaaatagcccgacatcattttttctgggtaacatgaat
tcagacgaaatgataattcaactggataccacccgctccctcgtaatagaaaatagcgat
ctgcaattctcatttggtctgcaatatcgacgagaaggtttcgaaatacttaaaggggag
tacttaagttacgcagacgggaataatggtttagagcctggtgcacaaggttatcctggt
ttttctcctgaagccgaaagtaacgtttctcgtaataatataaacggttacttagattta
gcatgggatgtttctgaaacgctctttttggcaagcgcactacgttacgaaaagtttagt
gactctgctggagatgaaattttatggaaagttaacctgcggtatgagctcagtgacagt
gtcgcgtttcggtcttcggtgaatactggttttagagcaccaagtattcagcaaataggc
ttccggggtagtcgtgggcaattcaccgatttagacaacgacggtttcgctgaaattatt
gtgctacgtaagactttacctgcaactaatcctgctgcaaaggctttaggagcaaccccc
ttagcacctgagacatcggttaatgttagcgcaggcattagctacaccccgcgagagact
atatcgtttaccatggatttttatcaaattgatgtagatgaccgtatcgctcaatcttct
caatttaatcgcggtgataaacgtttggctttatctggcggtactataggtaatgaaatt
tcagcgcttcttgatgaagcaggttttgacgcatcattaggcgctctaaactattttaca
aatgccattgatacacgaagtcgtggtgtcgatatcgttgctacttggtcgcctaaaatg
gtgatgggtcatctaatcctcagcggtgcatacaattacaacaaagttgatgttgttaat
tcgctcgacaatcctcaggagttatcaggtttggtattagctgatggctcgcaaatagca
cagttcgatcgtgaacgtttaggtacctataccgatgcagtacctgattctaaacttagt
atttctgccaactacggattagataaatggctaataaatgttcgcgccactcgcttcggc
caatggacagtcaaaggtattactgagaacctcgatacaaaaaaccaagcaaaatggata
gttaacctagaagccggttatcaattagaaaacggactcgcgttctttgctggtgctaac
aacatcctcaatgtttatccaaaggaacgctcagctaattctttagggactaacttctat
gatacctattcaccatatggtttcactggaggaagctggtacatacgtacttcttatgtg
tggtaa
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