Paraglaciecola sp. T6c: Patl_0939
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Entry
Patl_0939 CDS
T00372
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
pat
Paraglaciecola sp. T6c
Brite
KEGG Orthology (KO) [BR:
pat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pat02000
]
Patl_0939
Transporters [BR:
pat02000
]
Other transporters
Pores ion channels [TC:
1
]
Patl_0939
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
ABG39465
LinkDB
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Position
complement(1120789..1123080)
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AA seq
763 aa
AA seq
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MQSTHTINFTSTPVSSSAGHSCSTRILRHSALALMVSAALSGTSLHAQENSAQAQKEAEP
YERVIVTSRKRSESMNDVPISINVVGEGLIENLGAADFTDLLGVVPSLTAYENGPGRTRL
SIRGVANGGGNDNDTQNQETVGIYLDEIPISMGGMNPELALFDLKRVEVLRGPQGTLFGA
GSMTGTVRLVSNDPDLSKFEGKYELSASKIEHGSNNKSVKALVNVPIIENELAVRVSGYY
LDNGGYIDNSLTGEKNLNDGLSKGAKIAALYIPTNELSIELSYLHHDYSDDGRPVDIDST
PLFVRDYPSFDGYDDTMDIGNLTLTYDLDWAELTSSTSYFDRSIVNPRSLDLLFESALPP
GITPHELVDLTDSEVFVQELRLASTTDSDLQWTVGAYADKKDVFYENTFPVPGADAILGV
PSSAFGAPEDHLFYGFDDLTVKTYAFFGELYYDIGDLSITAGLRYFNWEQEIEFYQSGLF
NGEANSDTRPKGKVDGYNPKLNVSYHLNRDNLVYVQAAKGFRYGGINGAIPESVCADELA
QVERDGGDTRFFDPDEIWNYEVGVKGSDTQGTVSYNATYFHIDWSDMQTSRSFECGFGFK
ENVGDATSKGLELEVTVKPLDGLVLSAGGAYIDTTLDADVPNLDAQKGDPAPFVPEFSFT
TSAEYSTELNEDLEGFGWVNVQYTDDRSTEFSEQNSNYRKMDAYTVANMRVGIRFSGYEI
SLFANNMFDDDGVVRAIGRPPFDPPASIRVTPRTIGMTFRGGF
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagcacacacacaataaatttcacctctacacctgtcagttcatctgccggtcac
tcctgtagcaccagaatattacgccattcagccctagcactgatggtcagcgcggcctta
agtggaaccagtctgcacgcacaagaaaacagtgcccaagcacaaaaagaagctgaaccc
tacgagcgagtcatagtcacatcacgtaagcgctcagagtcaatgaacgacgtgcccatt
agtattaacgtagtgggtgaaggtttgattgaaaatttaggcgccgctgacttcactgat
ttgcttggtgtggtgcccagccttacagcgtacgagaatggccccggccggacgcgctta
tctattcgtggcgtagcaaacggcgggggtaacgacaacgacacccaaaaccaagaaacc
gtgggcatttacctagatgaaattcccatttcaatgggcggcatgaacccagaattggct
ttgtttgatttaaaacgggtcgaagtattacgtgggccacagggtacgctgtttggcgca
ggctcaatgacaggcaccgtacgcttagtgtctaatgatccagacctatccaaatttgaa
ggcaagtacgaacttagcgcatcaaaaatagagcatggtagcaacaataaatccgttaaa
gcgttagtcaacgtgcccattatcgaaaacgaattggccgtacgcgtcagtggttattat
cttgataatggtggctatattgataacagcttaaccggtgaaaaaaaccttaacgatgga
ttatccaaaggagccaaaatagcggctttatatattcctactaacgaattaagcattgag
cttagttacttacaccacgactattcagatgatgggcgtcctgtagatatcgactccacg
cccctatttgtgcgcgattatccctccttcgatggttacgacgataccatggacataggt
aacctgaccctaacctacgatctagattgggctgagttaacgagctctacgtcctacttt
gaccgttctatcgttaaccctcgttcactggatctgttatttgaatcagctctaccaccg
ggcataacacctcatgaattggtcgacttaacggactcagaagtcttcgtgcaagagttg
cgcttagcctcaaccaccgacagtgatttacaatggacggtaggtgcatacgctgataaa
aaagacgtgttttatgaaaataccttccctgttcctggggctgatgcaattctaggggtg
ccctcttccgcctttggtgcccccgaggatcacttattttatggctttgatgatttaacc
gtgaaaacctacgcctttttcggcgaactctactatgacattggtgacttatccatcacc
gcaggcttacgttactttaactgggaacaagagattgaattttatcagtcaggcttgttc
aatggcgaagccaacagtgatacacgccctaaaggcaaagtcgatggctacaaccctaag
cttaatgtgtcgtatcatttaaatcgcgataatttagtctatgtacaagccgcaaaaggc
ttccgttacgggggaattaacggcgctattcctgaatcagtgtgtgccgatgagctggca
caggttgaacgtgatggtggcgatacacgcttcttcgacccggatgaaatctggaactac
gaagtcggtgtaaaaggcagtgacacccaaggcaccgtgagctacaacgccacatacttc
cacatcgactggagcgacatgcaaaccagccgcagctttgaatgtggttttggtttcaaa
gaaaatgttggggatgccaccagtaaaggccttgaactagaagtcacagtgaaacctctt
gatggcttggtgctatcggctggcggcgcttacatcgacaccacgttggatgcagatgta
cccaatctagatgcgcaaaaaggcgacccagcccctttcgtacctgagttctctttcacg
acatcagcggaatactccactgaattaaacgaagatcttgaaggtttcggttgggtcaat
gtgcaatacacggatgatcgctcaaccgaattcagtgagcaaaactcgaactatcgcaag
atggacgcctacacagtggcaaatatgcgcgtgggtattcgcttctctggttacgagata
tccttgtttgccaacaacatgtttgatgacgatggtgtagtcagagccattggtcgccca
ccgtttgatccacctgccagcatacgtgttacaccgcgtaccataggcatgacctttaga
ggtggtttttaa
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