Paraglaciecola sp. T6c: Patl_0969
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Entry
Patl_0969 CDS
T00372
Name
(GenBank) transcriptional regulator, RpiR family
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
pat
Paraglaciecola sp. T6c
Brite
KEGG Orthology (KO) [BR:
pat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pat03000
]
Patl_0969
Transcription factors [BR:
pat03000
]
Prokaryotic type
Helix-turn-helix
Other families
Patl_0969
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
HTH_24
Penicillinase_R
HTH_29
MarR
TrmB
HTH_Crp_2
DUF3640
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
ABG39495
UniProt:
A0A9J9EQD5
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Position
complement(1160140..1160994)
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AA seq
284 aa
AA seq
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MNILEKITQHKLAFSKSERKVAEVILANPQVAIHSSIATLAKMSDVSEPTVNRFCRRLDT
KGYPDFKLHLAQSLANGTPYVNRHVEEDDGPEEYTKKIFESTMASLEVARQSVDINTINR
VVDLLTQAQKISFFGLGASASVAHDALNKFFRFNVPVVYFEDILMQRMSCMNSSEDDVVV
LISHTGRTKSLVEVAQIARSNDATVVGITSQNSPLAKECNLVLSLEVPEDTDMYMPMASR
IAQLTLIDILATGFTLRRGTKFRENLKRVKDTLRGSRYDKRNEQ
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaatattcttgaaaaaataactcagcataaattagcgttcagcaagtcagaacgtaag
gtcgccgaagtcattttggccaaccctcaagtcgctatccatagcagcatcgccaccttg
gctaagatgtctgatgtcagcgagcccactgttaatcgtttttgcagacgcttggatacc
aaggggtatcctgattttaaattacacctggcccaaagcctcgcgaatggcaccccttac
gttaatcgacacgttgaagaagatgatggcccagaggaatacaccaaaaagattttcgaa
tcgaccatggcctcactcgaggttgcccgccaatcggttgatatcaatacgatcaacaga
gtggtagatttgttgacacaggcgcaaaaaatttccttctttggccttggcgcctcagcg
tcggtcgctcatgatgccctcaacaagttctttcgtttcaatgttccggttgtctatttt
gaagatattttaatgcagcgtatgagctgtatgaactcatctgaagacgatgttgttgtg
cttatatctcacactggtcgcacaaaaagcttagtggaagtcgcacaaattgcccgcagt
aatgatgctaccgtggtaggcattacctcgcaaaatagtcccttggcgaaagagtgtaat
ttagttttgtcattagaagtgcctgaagatacagacatgtatatgcctatggcatcacgt
attgctcagctaacgttaatcgatatattagcgacaggctttactttacgaagaggtact
aaattccgcgaaaacttgaaacgagttaaagataccttgcgaggctctcgttacgataag
cggaatgaacagtag
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