Paraglaciecola sp. T6c: Patl_0998
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Entry
Patl_0998 CDS
T00372
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pat
Paraglaciecola sp. T6c
Pathway
pat00061
Fatty acid biosynthesis
pat00071
Fatty acid degradation
pat01100
Metabolic pathways
pat01212
Fatty acid metabolism
pat02024
Quorum sensing
pat04146
Peroxisome
Module
pat_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pat00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Patl_0998
00071 Fatty acid degradation
Patl_0998
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Patl_0998
09145 Cellular community - prokaryotes
02024 Quorum sensing
Patl_0998
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pat01004
]
Patl_0998
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pat04147
]
Patl_0998
Enzymes [BR:
pat01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Patl_0998
Lipid biosynthesis proteins [BR:
pat01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Patl_0998
Exosome [BR:
pat04147
]
Exosomal proteins
Exosomal proteins of breast milk
Patl_0998
Exosomal proteins of breast cancer cells
Patl_0998
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ABG39524
UniProt:
A0A9J9ERB2
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All DBs
Position
1189933..1191573
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AA seq
546 aa
AA seq
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MSLKTPLEMMYHWEDTTPQKVYLKQPINGAVISYTWVQTADKVRRAAAGLIALNLPAGSH
IAVLSKNCAEWFIADLAIMLAGHISVPIYSTAGEKTIQYVLNHAACPVIFVGKLDDTAEQ
VAAIPEGVTKLAFSYPGIEADKDWDSLMANEPYLERPVPDMSSTMTIIYTSGSTGNPKGV
VHTYNSISWAASNSRNELSVGDEDRILSYLPLAHITERVLVEMASFYANTQIGFIESLDT
FNRDICHLRPTLFISVPRLWTRFQMGVLANMPQKKLDFLLKIPFVGNIVASKIRTKLGLD
KARMCASGSAPISPATLKWFLKVGVKISEGWGMTENSAYGTCCVPFREDKIGSIGRAYEG
VDIRIGEEGEIQVKGPCNMQEYYLEPEKTAETFTEDGYLRTGDKGAIDSDGYIKITGRLK
EIFKTAKGKYIAPVPIEALIMGNSSVEQVCVTGSQLKQPIALVVLSEDATKQDKDKVEKS
LLATLESVNAGLESHAVLDRLVIMKDDWTVENGLLTPTLKIKRHLLEEKYDGLINAPERE
KLIYQK
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttaaagacgcccttagaaatgatgtaccactgggaagatacaacgccgcagaag
gtatatttgaagcaaccgattaacggtgctgttattagttatacatgggtacagacggca
gacaaagtacgccgcgcggcagctggattaattgcgctgaacttaccagcgggtagccac
attgccgtattatctaagaactgtgctgaatggttcattgctgacttagctattatgttg
gccggtcatatatccgtaccaatttattcaacagccggcgagaaaacgattcaatatgta
ttaaatcacgcagcatgtcctgttatttttgtgggcaagttagatgatactgctgagcaa
gtagcagcgatccctgagggcgttactaagctagcattttcttatcctggtattgaagcc
gataaggattgggattcattgatggcaaatgagccctatttagagcgcccagtacccgat
atgagcagcactatgacgattatctatacgtcgggcagcacgggtaaccctaaaggtgta
gtgcatacctataattcgattagttgggctgcgagcaattcaagaaatgaattaagcgtt
ggcgatgaagaccgtatattgagttacttgccattggcgcatatcaccgagcgcgttttg
gtggaaatggctagtttctacgcaaacactcaaattggttttatagagtcgcttgataca
ttcaatcgcgatatttgccacctaaggcctacgttatttatttctgttccgcgtctttgg
actcgttttcaaatgggggttttagcaaacatgccccaaaagaaactcgattttctgctg
aaaataccgtttgtcggcaatatagtcgcgagtaagattagaactaaacttggcttagat
aaggctcgtatgtgcgccagtggatccgctcctatttcgccagccacccttaaatggttt
ttgaaagtaggcgttaaaatatctgaaggatggggaatgacagaaaacagtgcttacggt
acctgttgtgttccatttagagaggacaaaattggtagtattggccgcgcttatgaaggt
gtcgatattagaattggcgaagagggcgagatacaagttaaagggccttgtaatatgcag
gaatattatctggagcctgaaaaaaccgctgaaacctttaccgaagacggatacttgcgc
acaggtgataagggcgcaatcgatagcgatggctatattaaaattaccgggcgcttaaaa
gagatatttaaaacagccaagggtaagtatatcgcgccagtaccgattgaagctctcatt
atgggcaactcttctgtagagcaagtctgtgtcaccggctcgcaattaaaacagcctatt
gcgttagtcgtattatcagaagatgccaccaaacaagacaaagacaaagtagaaaagagc
ctgttagcaaccttggaatcggttaacgctggtttagaaagtcacgcagtactcgaccgt
ttagtgatcatgaaagatgattggactgtagagaacggactactaacccctacgctaaag
ataaagcgccatttactggaagaaaaatacgatggactaattaacgctcccgagagagaa
aagttaatttatcaaaaatag
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