Paraglaciecola sp. T6c: Patl_1133
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Entry
Patl_1133 CDS
T00372
Name
(GenBank) periplasmic binding protein
KO
K06858
vitamin B12 transport system substrate-binding protein
Organism
pat
Paraglaciecola sp. T6c
Pathway
pat02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pat00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Patl_1133
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pat02000
]
Patl_1133
Transporters [BR:
pat02000
]
ABC transporters, prokaryotic type
Metallic cation, iron-siderophore and vitamin B12 transporters
Vitamin B12 transporter
Patl_1133
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_2
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
ABG39659
LinkDB
All DBs
Position
complement(1371290..1372339)
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AA seq
349 aa
AA seq
DB search
MTPTKQNRLVCLLTCIVVLAFNASSVSAQYETTKSERADANTAVDDVPGNEVNNAASNPS
NRAQSEISEADAIFDEISQLSKDKRQKLRIIALAPHIVESLFEVGAGQQIIATTAHADYP
EAAKDILQIGNYARLQIEKIVQLQPDVVIAWKTGNPGDDLARLKQYKIKVIYSNPRTLSQ
VGDELLMLGQVTGREDVAEQAASQYTAQLDRLKARYAKKPPMRTFYELWSRPLRTVANNA
WPQQQLALCGAKNPFANASDDYPSVGLEQVLVALPQVIIQPTQHASDTPDALNWAQWQHI
PAAKNGFIFHPNADKVHRMTSRMLDEVALMCEQIDKARQFYQTDTPLPH
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgacaccgacaaagcaaaataggctcgtttgtctgttaacctgtattgtcgtgctagcg
ttcaatgcatcaagcgtttctgcccaatatgaaacaactaaaagtgaacgtgccgatgct
aataccgctgttgatgatgtgcctggcaatgaggtaaataatgcggccagcaacccaagc
aatagagcgcaatctgaaatatcagaagctgacgctatctttgatgaaataagtcagctt
agcaaagataaacggcagaaattgcgcattattgcgttagcgccacatatcgtcgaatcg
ctttttgaagtaggtgcgggccagcaaattatcgccacaaccgcccatgcagattaccca
gaagcggccaaagacattctacaaattggtaactacgcccgcctacaaatcgaaaagatc
gtacagctgcagcctgacgtagtgattgcttggaaaaccggtaatccgggagatgattta
gcacggctgaagcagtacaaaattaaggttatatattcaaaccctaggaccttgtcacag
gtcggtgacgaacttctcatgctaggtcaggttacggggcgcgaagacgttgccgaacag
gccgcttcacaatatacggcgcagctcgacaggctcaaagcgcgctatgccaaaaagccc
cctatgcgcaccttttatgagctttggtctaggccactgcgcaccgtggcaaacaatgca
tggccgcaacaacaattagccctttgtggtgccaaaaacccgtttgccaacgccagcgat
gactatccgtctgtcggtttagagcaagtgctagtggcgttgccacaagtcattattcaa
cccacgcagcacgcctccgatacgcctgacgctttgaattgggcccagtggcaacacatt
ccagcagccaagaacggttttatctttcaccccaatgctgacaaagtacaccgcatgacc
agccgcatgttggatgaagtggcactgatgtgcgaacaaatcgataaggcccgtcagttt
taccagactgatacgccgttaccccattaa
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