Paraglaciecola sp. T6c: Patl_1142
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Entry
Patl_1142 CDS
T00372
Name
(GenBank) TonB-dependent siderophore receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
pat
Paraglaciecola sp. T6c
Brite
KEGG Orthology (KO) [BR:
pat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pat02000
]
Patl_1142
Transporters [BR:
pat02000
]
Other transporters
Pores ion channels [TC:
1
]
Patl_1142
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
UfSP_MPN_N
Motif
Other DBs
NCBI-ProteinID:
ABG39668
LinkDB
All DBs
Position
1380640..1382775
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AA seq
711 aa
AA seq
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MARNAASLGCFLSGITALGLSSGVLAQQPSDDIEHLEVTGRAQQFYLDTRTKLGTKTDAD
LLDIPMSAQVLTAQLISDQAARDITDLYRSIAGVSEYSYSGVTFRGFRDDGNVFYDGVRG
DPYSGFSVPDLFNVDRVEVLKGPAAALYGGGEPGGMINYVTKKPTFNESAEINLTLGNFD
LHGISGEATGALTDTTAYRLGGFYEAQDSFRNNADMENIELAGGLLHDFSDDTRLTTTFD
YIVQNLGGHRLRGVPVDDNGNFLVDRTYNANEKSDYQDLEAWVVQSELEHVFSDAFSVNS
TLRLMTNERDQAYHESRSWVDVNGDSEANIDDETIRREYRDQYRANDEISLTTDFVYDFS
VAGMQHQLLFGGDWHYIDTDYEYLRARYEADGVGNLNIFNLNYGETDPDSYNLTDQNRDG
IRRNRQGLYVQDMLQLGDKWTLMLGARFDHFEERDKQSAFEYGDQDVSYRAGISFKPLED
MSFYANYSESFNPVDATDQADASVTDLEPVTGDSIEVGVKNEWLGGSILTTLAVYHINKE
NLIASNPNFIEGENEDTESALINFGNVESDGAEFTLVGDITDELSITANYAYNDTIVVDG
SSSNTFGAGDRFVNAPRQQAGLWGRYAIHSINSSIALGVNYVSEQISSDAQKVKAFTVFD
ASWTTKWDNILLSVNVNNLFDKEYAVSGFSERNGHFPGQPREVIAQLKYSF
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtaatgcagcttcacttggttgttttttatccggtatcaccgctttaggatta
agctctggtgttttagctcagcaacccagcgatgacattgagcatttagaagtgactggg
cgagcacagcagttttatttagacacccgcacgaagttaggcactaagactgatgccgat
ttacttgatatacccatgtcagcgcaagtgcttaccgctcagctgatttctgaccaagcg
gcgcgagatatcaccgatttatatcgctctatcgctggggtcagtgaatacagttattca
ggggtgacatttcgcggttttcgcgatgatggcaatgttttttatgatggtgtaagaggt
gatccttattcaggattcagcgtgcctgatttatttaatgttgatcgggttgaggtgcta
aaaggcccagctgctgcactgtatggtggtggcgagcccggtggcatgatcaactatgtg
accaaaaagccaaccttcaatgaaagcgcagaaattaatctgacgttaggtaacttcgac
ttgcacggtatttcaggggaagcgacgggagcattaaccgacaccacagcatatcgtttg
ggcggcttttatgaagcccaagatagctttcgtaacaatgctgatatggaaaacatcgaa
cttgctggggggctattacatgatttcagtgacgatacccgattaaccaccacttttgat
tacatagtgcagaatcttggtgggcacagactgcgaggcgtgccggtggacgataacggt
aattttttggttgatcgcacctacaacgccaatgaaaaaagtgattaccaagatcttgaa
gcttgggttgtgcagtctgaacttgagcacgtatttagtgatgcgtttagcgtgaattca
accttacgcttgatgactaatgagcgtgatcaggcctatcacgaatcgcgcagttgggtt
gatgttaacggcgacagtgaagcaaacattgatgatgaaaccattcgccgagaatatcgg
gatcaatacagagccaatgatgaaattagcttaaccactgattttgtttatgattttagt
gttgctggcatgcagcaccaattattgtttggtggtgattggcattacatagacactgat
tacgagtatctgcgcgcccgctacgaagccgatggcgtgggtaacctgaatatattcaac
cttaattatggtgaaaccgacccggatagctacaacctgacggatcaaaatcgcgatggc
atcaggcgtaatcgccaaggcttgtacgtgcaagacatgctgcaactgggcgacaagtgg
acgctgatgttaggggcgcggtttgatcactttgaagagcgtgataaacaaagcgccttt
gagtatggcgatcaagatgtttcttatcgtgctgggattagctttaaaccacttgaagat
atgtcattttatgcgaattactctgaaagttttaatcctgtagatgccacagaccaagct
gatgcgagtgtgacagatcttgagcctgttactggggactcaattgaagtcggtgtgaaa
aatgaatggttaggcggtagcattctgaccaccttggcggtgtatcacatcaacaaagag
aatttgatcgccagtaaccctaattttattgaaggcgagaatgaggacactgaatcagcc
ttgataaactttggcaacgtggaaagtgacggcgctgagtttacgcttgtgggggatatt
acggatgagctgagcatcactgccaactatgcatacaatgacaccatagtggttgacggc
agttcaagcaacacctttggggcaggggatcgctttgtaaatgcgccgcgacagcaagct
ggtttatgggggcgttacgctatacatagcatcaattcgtcaattgcattgggcgttaat
tacgtcagtgagcaaatcagctctgacgcccaaaaggtcaaggcatttactgtatttgac
gcgagttggactaccaagtgggacaatatactccttagcgtaaacgtgaataatttgttt
gataaagaatatgccgtgagcggtttcagcgaacgtaatggccatttcccagggcaacct
agagaagtgattgctcagttgaaatacagtttttaa
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