Paraglaciecola sp. T6c: Patl_1264
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Entry
Patl_1264 CDS
T00372
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pat
Paraglaciecola sp. T6c
Pathway
pat03030
DNA replication
pat03430
Mismatch repair
pat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Patl_1264
03430 Mismatch repair
Patl_1264
03440 Homologous recombination
Patl_1264
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pat03032
]
Patl_1264
03400 DNA repair and recombination proteins [BR:
pat03400
]
Patl_1264
Enzymes [BR:
pat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Patl_1264
DNA replication proteins [BR:
pat03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Patl_1264
DNA repair and recombination proteins [BR:
pat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Patl_1264
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ABG39790
UniProt:
A0A9J9B8Q7
LinkDB
All DBs
Position
1513248..1516715
Genome browser
AA seq
1155 aa
AA seq
DB search
MSDCKFVHLRVHSDYSMLDGLNKVKPLIAHVKSLNMPAVALTDQMNMCGLVKFYEQAHSN
GIKPIIGTDFWVQSDALEDHVFRLTLLAANNKGYKNITLLISKAYLRGSVQDKAVIDQEW
LVEHSEGVIILSGGRMGDLGVYLTKGNVGLAEKATAFYQQHFPDRFYLELTRTGRLGEED
YIHRAVEWAGQHDLPVVATNEVCFISPDNFEAHEIRVAIHDGYTLNDPRRPKLYSEQQYM
RTSEEMCELFADIPQAIENTVEIAKRCNVSVLLGTYFLPDFPTGDMSIADFLVKVSEEGL
EKRLAFLFPDEEERLAKRPEYDERLKIELVVINQMGFPGYFLIVMEFIQWSKDNGIPVGP
GRGSGAGSLVAYALGITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMDRRDEVIDHVAE
MYGRDAVSQIITFGTMAAKAVVRDVGRVLGHPYGFVDRISKLIPPTPGMTLTKAFEEEPR
LPELYAYDEEVKDLIDMARILEGVTRNAGKHAGGVVIAPDKITDFAPLYCDDEGKNPVTQ
FDKNDVETAGLVKFDFLGLRTLTIIQWAIDMISAGKGVDIDILAIPMDDKKSFKLLQRSE
TTAVFQLESRGMKDLIKRLRPDSFEDIIALVALFRPGPLQSGMVDNFIDRKHGREAISYP
DATYQHECLKEILEPTYGIILYQEQVMQIAQEMSGYSLGGADLLRRAMGKKKPEEMAKQR
ESFETGAKNNNIDPELAIKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKTHYPAEFMA
AVMSADMDNTDKIVTLVDECQRMGITLLPPDVNAGSYKFTVDSEGRIVYGIGAIKGVGEG
PIAAIIEARENHEKFTDLFDFCAKVDTKRINKRVLEKLVYAGALDNLGPHRASIMATLPE
AISAADQHAKAEAHGQSDMFGLLTTEPEQVEQAFAKVPHWAEKVWLDGEKVTLGLYLTGH
PINQYAQEIKHYCTGRLIDLKPTHKDVVSYAVGLVIGVRVMTNKRGRRWGIVTLDDKSAR
IDVRFFPDLFEQYEEILQSDRILVVSGQVSFDEFSGGNTIGARDAMDIVQAREKNAKWLS
MQFESSWCNASTLAKLQAILAPYQGGSCPVQAHVVHPDAEVTLALGAQWYVTPEDQLLFE
LQQQFGKEHVELVFH
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattgtaaatttgtacacttgagagtccacagcgactattcaatgctagacggt
ttgaataaagtaaaaccgctgattgcccatgtaaaatcactcaatatgcctgcggttgcg
ttaaccgatcagatgaacatgtgtggcctggtaaaattttatgagcaggcccattcaaac
ggcattaaacccattattggtacggacttctgggtgcagtcagatgccctagaagatcat
gtttttcgcttgacgttgttagccgctaataacaaaggctataaaaatatcactttgctc
atctctaaagcgtatctgcgcggcagtgtgcaagacaaagccgttatagaccaagaatgg
ttggttgagcatagtgaaggggtgatcatcctttcaggtggccgtatgggcgacttaggg
gtttatctaaccaaaggcaatgttggcctagctgaaaaggctaccgccttttaccagcag
cattttcctgaccgtttctacttagaattaacacgcacagggcgcttaggcgaagaagac
tatattcaccgagcggtggagtgggcggggcaacatgacttgcccgtagtggccacaaac
gaagtgtgctttatctcacctgataactttgaagcgcacgaaattcgcgttgccattcat
gatggttacacactgaacgatccacgtcgtcctaagttgtacagtgaacaacaatacatg
cgcaccagcgaggaaatgtgtgagctatttgccgacattccccaagcgattgagaacaca
gttgagattgccaagcgttgtaatgtatcagtactactaggcacttatttcctaccagat
ttccctacgggcgatatgtccatcgcagacttcttagtaaaagtatctgaagaggggtta
gaaaaacgcttagcgtttcttttccctgacgaagaagaacgccttgctaaacgcccagaa
tacgatgaacgattaaagattgagttagtggtaatcaaccaaatgggatttcccggttac
ttcttgatcgtaatggaatttattcagtggagtaaagataacggtattccagttggtccg
ggacgagggtcaggtgctggttcactggtggcatatgcactagggataacggatttggat
ccgctggaatttgatttgctgttcgagcgattcttgaaccctgagcgggtttccatgccg
gatttcgacgtcgatttctgtatggacagacgcgacgaagtgattgatcacgttgctgaa
atgtacggtcgtgatgcggtatcgcaaattatcacatttggtaccatggctgcgaaggcc
gttgtgcgcgacgttgggcgagttttgggtcacccttacggcttcgttgatcgtatttca
aagcttattccacctacgccaggtatgacgttaaccaaagcatttgaagaagagccgcga
ttaccggagctttacgcctacgatgaagaagtcaaagatctcatcgatatggcgcgaatt
cttgaaggggtaactcgtaacgcgggtaaacacgccggtggtgtggttatcgcgccagat
aaaattaccgatttcgcgcccttatattgtgatgatgaggggaaaaacccagtcacgcaa
tttgataaaaatgatgttgaaacggcaggtctggttaagtttgatttcttgggcttacgt
acactgaccattattcagtgggccatcgatatgatttccgccggtaaaggcgtcgatatc
gatatcttggcgattccaatggatgacaagaaatcctttaaactcttacagcgctctgaa
accacagccgttttccagcttgaatcccgcggtatgaaggatttgatcaagcgacttcga
cccgatagttttgaagatattatcgcactggtagccctatttagaccgggtcctttgcaa
tcaggcatggtggacaactttatcgaccgtaaacatggccgagaagcaatctcctatccc
gatgccacataccaacatgaatgcttgaaagaaattttagagccgacatacggcattatc
ttgtatcaagaacaagttatgcagatagctcaggaaatgtctgggtatagtttgggtggg
gcagatttacttcgccgagctatgggtaagaaaaagcccgaagaaatggccaaacagcga
gagtcatttgagaccggcgccaaaaacaacaacattgaccctgagttggcgattaaaatc
ttcgatctggtagaaaagttcgctgggtatggttttaacaaatctcactctgctgcttat
gccttggtctcttatcaaaccctttggttaaaaacccattaccctgctgaatttatggcg
gcggtaatgtccgctgatatggacaacacagataaaatcgtgaccttagtcgacgaatgt
cagcgaatgggaattaccttattgccacctgatgtcaatgcaggtagctacaagtttacc
gttgatagcgaggggcgaattgtttatggcatcggagccatcaaaggtgtgggggaaggc
cctatagccgcgatcattgaagcgcgggaaaaccacgaaaaattcacagacctattcgat
ttctgtgcaaaagtggatactaaacggatcaataagcgagtgcttgaaaaactcgtttac
gctggcgcactggacaaccttgggccacatcgagcgtctattatggccaccttaccggaa
gcaatatctgccgcagatcaacacgctaaagccgaagcccacgggcaaagtgatatgttt
ggcctgctaaccacagagcctgagcaagtggagcaagcgtttgctaaagtgccacattgg
gcagagaaagtctggttagacggcgaaaaggtcacattagggctttacctaacgggacac
ccaattaaccaatatgcccaagaaattaaacattactgtacgggtcgcttgattgatctc
aaaccgacccataaagatgtcgtatcatacgcggtagggttagttattggcgtacgggtg
atgaccaataaacgaggtcgacgttggggcattgtcacattagatgataaaagtgctagg
atagatgtacgttttttccccgatctgtttgaacaatacgaggaaatactgcaatctgac
cgaatattggtggtaagtggacaggtcagctttgatgaattttccgggggcaatacaata
ggcgcccgcgacgctatggacatagttcaggcgagggaaaagaacgcaaaatggttaagt
atgcagtttgaatcgagctggtgtaatgcctcaacactcgctaaactgcaagcaatatta
gcgccttatcaaggcggaagctgtccggtacaagcccatgttgtgcatccggatgccgag
gtaacattagcgttaggtgcccagtggtacgttacccctgaggatcagttactttttgaa
ttacagcagcagttcggtaaagagcatgtagagctggtgtttcattga
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