Paraglaciecola sp. T6c: Patl_1320
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Entry
Patl_1320 CDS
T00372
Name
(GenBank) farnesyl-diphosphate synthase
KO
K00795
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
pat
Paraglaciecola sp. T6c
Pathway
pat00900
Terpenoid backbone biosynthesis
pat01100
Metabolic pathways
pat01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pat00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
Patl_1320
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pat01006
]
Patl_1320
Enzymes [BR:
pat01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
Patl_1320
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
Patl_1320
Prenyltransferases [BR:
pat01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
Patl_1320
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
ABG39846
UniProt:
A0A9J9B8N9
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All DBs
Position
complement(1587266..1588156)
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AA seq
296 aa
AA seq
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MTFETQQKRVHQHVDALLQAQIGKLGDHAPTLKNAMQYALLMGGKRMRPFLVYAVGEALG
IEQSDLDAPALALECIHAYSLVHDDLPAMDDDDLRRGHPTCHIQFDEANAILAGDALQTL
AFEIIVNYPLSDFANAQRIELVRILGQASGYDGMCGGQGIDLASTNKLITQTQLELLHSK
KTGALITAAVKMASVLCPSVSDESKSLLQQYASTIGLAFQVQDDILDVVGDSQTLGKPQG
SDQEQNKSTYPALLGLEGAQGYLAQLHQEALQALDALPYNTQVLKSFTDFVIHRNH
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgacatttgagactcaacagaagcgtgtgcatcaacacgttgacgccttactacaagcg
cagattggcaaacttggtgaccatgccccaacgttaaaaaatgccatgcagtacgccttg
ctaatgggcggaaaacgcatgcgaccttttttagtgtatgctgtcggcgaagctttaggg
attgaacagtctgatcttgatgcccccgccctcgcattagaatgtatccatgcttattcc
ttggtacacgatgacttgcctgcgatggacgacgacgatttacgccgcgggcaccccacg
tgtcacattcagtttgatgaagccaacgctattttagccggcgatgccctgcaaactttg
gcctttgagatcatcgttaattacccattatcagattttgccaatgcgcaacgtatcgaa
ttggtgcgtattttaggtcaagcatctggttacgacggcatgtgtggcggacaaggaatt
gatttagcgtccaccaataagctgatcactcaaacacaactggagttgctgcatagcaaa
aaaaccggggcgcttatcactgcagcggtaaaaatggcatccgtgttgtgcccgtcagtt
agcgatgaaagcaaatcgctattgcagcaatatgcgtccaccattggtttggcgtttcag
gtgcaggacgatattttggatgtggtcggtgattcacaaaccttaggtaaaccccaaggt
tcagaccaagagcagaataaaagtacctatcctgcactgcttggtttagaaggtgctcag
ggctatctcgctcaacttcatcaagaagcgcttcaagctttggacgctttaccttacaat
acacaggtgttgaaatcatttaccgatttcgtcattcatcgtaatcattga
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