Paraglaciecola sp. T6c: Patl_1368
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Entry
Patl_1368 CDS
T00372
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pat
Paraglaciecola sp. T6c
Pathway
pat00061
Fatty acid biosynthesis
pat00071
Fatty acid degradation
pat01100
Metabolic pathways
pat01212
Fatty acid metabolism
pat02024
Quorum sensing
pat04146
Peroxisome
Module
pat_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pat00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Patl_1368
00071 Fatty acid degradation
Patl_1368
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Patl_1368
09145 Cellular community - prokaryotes
02024 Quorum sensing
Patl_1368
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pat01004
]
Patl_1368
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pat04147
]
Patl_1368
Enzymes [BR:
pat01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Patl_1368
Lipid biosynthesis proteins [BR:
pat01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Patl_1368
Exosome [BR:
pat04147
]
Exosomal proteins
Exosomal proteins of breast milk
Patl_1368
Exosomal proteins of breast cancer cells
Patl_1368
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ABG39894
UniProt:
A0A9J9B8U5
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All DBs
Position
1649245..1650792
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AA seq
515 aa
AA seq
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MSGHFHLAGEQVKREDMLSRARKIAQILQNKGVSTGDVIAILLRNDTTLYEVVEACRYVG
AYYVTLNWHGTQAELMPILSDSGAKVLVGHSNLLDQFTQPLPPDLAVLVVDTPDVINHRY
APSDVVPTAKNSTDDRLSAANHGERLAAVLSDTPEIESQPERFRGMFSYTSGSTGKPKGI
KREYDEQRPDPYTVFAGLAKALMQLDSGDRFYIAAPLYHSAPHALTLCCLAAGNVTVFIE
PKFDPERFLADVQQHKITHTYIVPTMMIRLLKLPQEVREKYDMSSLRYALSTGSAWPVDV
KQGMIDWFGPIFFESYGASELGFMTLISSQESLAKPGSVGKAIAGGSIIILDDAMQPVPT
GESGSIYVHLPMFGPFKYTNTQGTLDGLHYQNYTTLGDMGYLDADGYLFINDRKKDMIIS
GGANIFPAEIEAVLIHMPQIADCAIFGIPDSEFGEMIVLAAQCQPDQHLDIAQVCEFLDG
RIARFKWPKKLELHDQLPREDSGKIFKQRLRAAYV
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggccattttcatttagcgggtgaacaagtaaagcgtgaagacatgttatcccga
gcgagaaaaattgctcaaatactgcaaaacaaaggggtgtcaacaggtgacgtaattgcc
attttactgcgtaacgatactacgctttacgaggtcgtagaggcatgtcgctatgttggg
gcgtattatgtcactttgaattggcatggcacccaagcggaattaatgcccatccttagt
gatagtggcgcgaaagtattagtcggccacagcaatctactggatcaatttacgcaaccg
ctaccccctgatttagccgttttagtggttgatacgccagacgttatcaatcaccgctac
gcaccgtccgatgtagttcccacagcaaaaaattcgaccgacgataggctcagcgctgct
aaccatggggaacgattggccgcagtgcttagtgatacccctgaaatagaaagtcagcct
gagcgctttagaggcatgttttcatatacgtctggcagtacagggaagccaaaaggcatt
aaacgcgaatacgatgaacaaagacccgatccttacactgtctttgctggcctagcaaag
gcgcttatgcaattagacagcggtgatcgcttctatatagcagcgccgctttaccacagt
gctccacatgcattaacactatgctgcctggcggcaggaaacgtaactgtatttatcgag
cctaaatttgatccagagcgctttctagccgatgtgcagcagcataaaataacccatacc
tacatagtgcctactatgatgatccgcttgttaaagctgccacaagaggtacgtgaaaaa
tacgatatgtcgagtttacgctacgcattatccacgggctcggcttggcctgttgatgtt
aaacaaggcatgattgactggttcgggccgatattttttgagtcctatggtgccagtgaa
ttaggttttatgacgttaatttcatctcaagagtcgctggcgaaacccggctcagtaggc
aaagccatagcaggcggttcgataattatactggatgatgctatgcagccagtgcccacg
ggagaatcaggttctatttacgtacatctacccatgtttggaccgtttaaatacaccaat
acgcaggggacgctcgatggcctgcattaccaaaattacaccacactcggtgatatgggc
tatttagatgccgacggatacttgttcatcaacgatcgtaagaaagacatgatcatctca
ggcggcgcaaatatattccccgccgaaatagaggccgttctcattcatatgccgcaaata
gccgattgcgcaatcttcggtattcctgacagtgaatttggcgagatgatagtgctggcg
gctcaatgtcagccagaccaacatttagacatagcgcaagtgtgtgagtttttggacggg
cgtatcgcgcgtttcaaatggcctaaaaaactagagctacatgatcagttgccaagagaa
gacagcggcaaaatatttaaacaacgcttacgagcagcgtatgtttaa
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