Paraglaciecola sp. T6c: Patl_1520
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Entry
Patl_1520 CDS
T00372
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
pat
Paraglaciecola sp. T6c
Brite
KEGG Orthology (KO) [BR:
pat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pat02000
]
Patl_1520
Transporters [BR:
pat02000
]
Other transporters
Pores ion channels [TC:
1
]
Patl_1520
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
STN
Motif
Other DBs
NCBI-ProteinID:
ABG40042
LinkDB
All DBs
Position
complement(1825402..1828569)
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AA seq
1055 aa
AA seq
DB search
MKSHQSFKLSSLACSIMLMLQTGNSFAAQTQQQNIDIPAQKLDAALLELAEESETQILFS
SAITPDITTRGISATLSVDDALRILLENTSLEFVKRSADTFIIREKNKSTSSSSNTSETI
EPVEAVKSAAGTPAKKADGEASVERIKVVGSNIRVNQDSGALPISTFSAEDFEDLGITSG
ADLLAELPQQGEVSFNSERVVGGVNDARGDVSSVNLRGIGTGYSLTLLNGRRLVLHPGTQ
AEDLVPVTTVNSNALPVRGLKRVEVLRDGAAAIYGTDAIAGVINYVLKDKNTGGDVQFQY
GKNDGTDKDTFSLSGSGGWFFNNEQTHLTLSASVYEQDMLMASEREYAASSDTRNYPGLN
PEFVGNTSLDGRTTSTPWAELSSGSLGTFHIQPDTFDGCEVALGNGICADGGSLDRELRY
DSNSERSLSSEVSRVNLYALLTHDLTDEIELYGEALYYRAEADRLREQSGNLTAQRFTVA
SDAFYNPFGEDVTVRRYRPIDTGPRAINVEDYSYRFLTGLRGYYQDWDWDTALLYSKAHT
LDSANRVNTTLFQQAVNSTEQSTAYNLFNGGSLTSPNSGDDTGNDQDVIDGFMFNIERES
QTELALYDFKISRPDIFELPAGDVGMAVGIEYRYESFSDARSDALNGTDSFIDVVTGNPS
ALASTVLGSSPTPDSSGSRNVFSTYVEFAVPLLADLPLVKSLNMQLAARYERFSDVGDIT
KPKISLAWQVNDIVQLRAAYAEGFKAPGLPQTTAVDVSRSNTRSDPISGIRQGTLEIRNG
SDDLKPETSTNTFAGIVFTPMKNLTLTADWWHIKQKDVVGILSSQTQILYDTLLRADGGS
NANVIRDENNEILYVTNDYTNLLPREIKGVDYSIFYKMSTEVGDFTFTANAANLTQFDQG
LDSITQQVVTAQESGNEAVLFNGEAVGIPGAAGDLLTKNGRPEWRSNIGIKWQKDSWGAG
VKYKYISELENVFLSYFDDAGDLIYQQIDDWSTVDAYASYSFKEQNSLLENTKLTLGARN
IGDKEPPFTSGTFGYESSVHSSSGRYLYMTLNKKF
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcacatcagtcgtttaaactcagctcccttgcttgcagcattatgctcatgctg
caaacagggaacagttttgcagctcaaacacagcaacagaacatagacatacccgcacaa
aaactcgatgcggcattgctcgaactcgccgaagaaagtgaaacgcaaattttgttttct
tctgccattaccccagatattaccactcgtggcatatcagccacgttatcagtagacgac
gccttacgtattttacttgaaaacacctcgttagagttcgttaagcgctctgcggatacg
tttatcattcgcgaaaaaaacaagagcacctcatcaagctccaatacatcagagactatt
gagcctgttgaggcagtaaaaagcgctgcaggtacaccagcaaaaaaggctgatggcgaa
gccagtgttgagcgcatcaaagttgtgggctcaaatattcgcgtcaaccaagactctggc
gcattgcctattagcacattcagtgccgaagacttcgaagatttaggcattactagcggt
gcagatttgctggctgaattgccccagcagggcgaagtcagcttcaacagcgagcgcgtg
gtgggcggtgtaaacgatgcccgtggcgatgtgtcctcggtcaatctgcgcggtatcggt
acagggtatagcttaacgctgcttaacggacggcgcttagtattgcaccctggtacccag
gcagaagacttagtgcccgtgaccacagtcaactcaaatgccctaccggtacggggcctt
aaacgcgtcgaagtgttacgcgacggtgccgctgcaatatacggtacagatgccatagcg
ggtgttattaattatgttctcaaagacaaaaacaccggtggcgacgtgcagttccaatac
ggtaaaaatgatggcactgacaaagacaccttcagtttatctggctctggcggttggttt
tttaacaatgaacaaacccacctgacactcagcgccagcgtgtatgagcaagatatgctc
atggcatctgagcgagaatatgcagccagttcagatacccgtaattatccaggtttgaac
cctgaatttgtcggcaacacctcattagatggtcgcactacctcaacgccttgggcagag
ttaagctcaggcagcctaggcacatttcacattcaaccagatacattcgatggttgtgag
gttgcccttggcaatggcatatgcgcagacggtggcagcttagatcgtgagttgcgttac
gattcaaactcagaacgttcattaagctcagaagtaagccgcgtaaatttatacgcattg
ctgacccatgacctgactgatgaaattgaattatatggcgaagctctgtattaccgagca
gaagctgaccgcctacgcgaacaaagcggaaacttaaccgctcagcgctttactgtcgcc
agtgatgcattttacaatccattcggcgaagacgtaacagttagacgctatcgccctatt
gatacgggcccacgtgcaattaatgttgaagattactcctaccgctttttgactggtctg
cgaggttattatcaagattgggactgggacacggcactgctttattcaaaagcgcatacc
ctagactctgcgaatcgggtgaatactactttgtttcagcaagcagtgaacagcacagaa
caaagcacagcctataacttgttcaacggtggcagcttaacttcgccaaacagtggcgat
gacacaggtaacgaccaagacgttatcgacggctttatgttcaatatcgagcgcgaatcc
caaaccgagctcgccctgtatgactttaaaatatcccgcccagacattttcgagttaccc
gccggggacgtgggcatggcagtgggtattgaatatcgctatgaaagtttctctgatgcc
cgtagtgatgcgttaaatggcactgatagttttattgatgtggtcaccggcaacccatcg
gcgcttgccagtacagtgctgggcagtagcccaacgccagactcttcaggtagtcgcaat
gtgttttccacttacgtggaatttgcagtgcctttattagctgatttacctctggtaaaa
agcttaaacatgcaattggctgctcgctatgagcgtttttcagatgtgggggatattacc
aaacccaaaatatccctcgcttggcaagtcaacgacatagttcagcttcgtgcagcttat
gccgaaggctttaaagcaccaggattaccgcaaaccaccgcggttgatgtgtcacgctca
aacacccgctctgatcccatatcaggcattcgccaaggcacccttgaaattcgtaacggt
agcgatgatttaaaacctgaaactagcactaacacctttgcaggcattgtgtttacccct
atgaaaaacctgacgttaaccgctgattggtggcacataaagcaaaaagacgtggtggga
attctaagcagtcaaacgcagattttgtacgatacgctactacgtgccgatggtggcagc
aatgccaacgttattcgtgatgaaaacaatgaaatcttgtatgtgacgaacgactacacc
aaccttttgcctcgtgaaattaaaggcgtcgactacagcatcttttacaaaatgagtact
gaagtaggcgatttcaccttcaccgctaatgcggcgaatttaacccaatttgaccagggc
ttggactccatcactcagcaggtagtcactgcccaagaaagcggtaatgaagcggtacta
tttaatggtgaagctgttggtattccgggtgccgctggtgatttactcactaaaaatggt
cgccccgaatggcgcagcaacatcggcattaagtggcaaaaagacagctggggtgctggg
gttaaatacaaatacatcagcgagctagaaaacgtctttttatcttattttgatgatgcg
ggtgatctgatttatcaacaaatcgacgattggtctacggttgatgcctacgcttcctac
tccttcaaagagcaaaacagtttactagagaacaccaagttaaccttaggtgcacgtaat
attggtgataaagaaccacctttcacctctggcacatttggctacgaaagcagtgttcac
tcttcatcaggccgctacttgtacatgactctgaacaagaagttttag
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