Paraglaciecola sp. T6c: Patl_1621
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Entry
Patl_1621 CDS
T00372
Name
(GenBank) transcriptional regulator, LysR family
KO
K17737
LysR family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
pat
Paraglaciecola sp. T6c
Brite
KEGG Orthology (KO) [BR:
pat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pat03000
]
Patl_1621
Transcription factors [BR:
pat03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Patl_1621
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GFIT
Motif
Pfam:
LysR_substrate
HTH_1
MarR_2
HTH_24
MbeD_MobD
DUF2859
MarR
Motif
Other DBs
NCBI-ProteinID:
ABG40143
UniProt:
A0A9J9BAH4
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Position
1927727..1928620
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AA seq
297 aa
AA seq
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MNVSYRQLQAFIQVAQSATFAEAAQKMFLSQPALSSAIKKMEEQVGGGLFSRTTRKVQLS
PEGQDFLPVAIRLMNDWQDAFGDLQQVFSMGRGKLSIAAMPSFAVGHLPAILGAFQSQFP
NVKVAVADIVMEQVINAVSEERVALGFTFETEQLDGLLFHPMFTDEFIAVLPKLHPLSQQ
SSVTWNALAQSPFIAMNRGSAIRRWVDNHYEALELKVNMVAEASQLATLGQFVEHGLGVS
IVPGLCQQQMQRLGLRCLPIEGDRLSKRVGMIKKVQGNMSVSAQALWDWVIKQSLAE
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtttcgtatcgccaactacaagcgtttatacaagtggcgcaatcggcaacgttt
gctgaagctgcgcaaaagatgtttctttcgcagcctgcgctgtccagtgccatcaaaaaa
atggaagagcaagtgggtggggggctgttttcacgcaccacacgtaaggtgcaactcagc
cctgaaggccaggacttcttacctgtagcaatacgcttgatgaatgactggcaagatgca
tttggcgacttgcagcaagtgttttcaatgggaagaggaaagttgtctatcgccgcgatg
ccctcgtttgctgtagggcatttaccggcgattctaggagcgtttcaatctcagtttcct
aacgtcaaggtcgccgtggcggatattgtaatggagcaagtcatcaatgccgtttctgag
gaacgagtagcgctgggttttacctttgaaaccgaacaattagacggcctactgtttcat
cccatgttcaccgacgagtttattgccgtgctgccaaagttacacccgttgagtcagcaa
agcagcgtcacgtggaatgcgttagcgcagtctccctttattgccatgaatagagggtcg
gccattcgcagatgggtcgacaaccattacgaagcgctagagctcaaggtaaatatggtg
gctgaggcatcgcaattagcgacactggggcaatttgtagagcatggtttgggggtgtct
attgtgcctgggctatgtcagcagcaaatgcagcgacttggattgaggtgcttaccgatc
gaaggagacagattgagtaagcgagtggggatgattaaaaaggtgcagggcaatatgtcc
gtttcggcgcaagccttgtgggactgggtgataaagcaatcattagcagagtga
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