Paraglaciecola sp. T6c: Patl_1909
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Entry
Patl_1909 CDS
T00372
Name
(GenBank) transcriptional regulator, AraC family
KO
K25495
AraC family transcriptional regulator, regulator of nimT
Organism
pat
Paraglaciecola sp. T6c
Brite
KEGG Orthology (KO) [BR:
pat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pat03000
]
Patl_1909
Transcription factors [BR:
pat03000
]
Prokaryotic type
Helix-turn-helix
AraC family
Patl_1909
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
AraC_binding
Cupin_2
AraC_binding_2
Motif
Other DBs
NCBI-ProteinID:
ABG40427
UniProt:
A0A9J9ESF2
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Position
complement(2309153..2309944)
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AA seq
263 aa
AA seq
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MSLLNFIQWDDLQQFEVMPQPVVARIEKVNNSHELPLHTHSKGQLILALHGHVTCEVQGK
MWMVPTQSAIWIPTHTLHSNRASDHAELCHVFIQPGELRMPDKTCTFALSVLAKELICHF
AKQDQHYPHFSPTNRLAQVLIDVVSESPQQPMNLPLPSHPTVAKLAQQLLSYPDDKKTLP
QWASYFAMSERTLARLIKRETGMTFGHWRAQMHVIIAVQKLMTNMTVQRVSEYLGYSSVS
AFITMFKNILGESPKRYIKQRVD
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgagtttattgaattttatacagtgggatgatttgcagcaatttgaggtgatgccccag
cccgtggtcgcgcgtattgagaaggtgaataacagccatgaattgccgctgcacacccat
tcgaaggggcaactaatactcgcgctgcacgggcatgtcacctgtgaagtacaggggaaa
atgtggatggtaccaacccagagcgcaatttggatacccactcacactcttcacagtaat
cgtgcatctgatcatgctgagctgtgccacgtgtttattcaacctggcgaactgcgcatg
cctgacaaaacctgtacattcgcgttaagcgtattggccaaggaactaatttgccatttt
gccaagcaagatcagcattacccacactttagcccgacaaacagattagctcaggttctg
atagacgtcgtcagtgaatccccccaacaacctatgaatttacctttacccagtcacccc
acggtggctaagctcgcccagcagcttttgtcttatcccgatgacaaaaaaacgcttccc
caatgggcgagctacttcgctatgtctgaacgcacgctagcacgattaataaagcgcgaa
acaggcatgaccttcggccactggcgagctcaaatgcacgtgatcattgccgtgcaaaaa
ctgatgaccaacatgaccgtacaaagagtatctgaatacttaggttacagctctgtcagt
gcctttattactatgttcaaaaatattctaggggaatcgccaaagcgatatataaagcag
cgagttgattag
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