Paraglaciecola sp. T6c: Patl_1980
Help
Entry
Patl_1980 CDS
T00372
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
pat
Paraglaciecola sp. T6c
Brite
KEGG Orthology (KO) [BR:
pat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pat02000
]
Patl_1980
Transporters [BR:
pat02000
]
Other transporters
Pores ion channels [TC:
1
]
Patl_1980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
SBP_bac_3
Motif
Other DBs
NCBI-ProteinID:
ABG40498
LinkDB
All DBs
Position
2405193..2407517
Genome browser
AA seq
774 aa
AA seq
DB search
MNKQRFTQSLIAGAVASVLCYQPALMAQEADNATQAEKKGLERIEVTARKTVESLQEVPI
SVTSLGAVELDEKGISVITEIQQFSPNTTLQNSRGTNSTLTAFIRGVGQQDPLWGYEPGV
GIYIDDVYVARPQGAVLDLLDVERIEVLRGPQGTLYGKNTIGGAIKYVTKPMSGDPTLNI
QGTVGSYSQRDIKLTGQFPVIEDKLYVGFGIADLTRDGYGEYLESALEGQDLENYNKDLT
AARVTVEFTPSDDLFFRFAWDKTEDDSNAKGGYRLLPSRLTDAPVPNSVFDSYTSLPTEN
NVELEGYSLTANWDVNDDISLKYIGAHRESYSPTNIDFDNTAIDIFDVPAIYEDENDTHE
LQLAYAGDGFNAVGGIYYYDGESCGQFEAILGFLGRAAFGVPGLTREVSGCNNSESIAAY
VQSSIDVTEQLSLTLGARYTDEEKQATVRNGLIFDNVYPESNWIPGYVRPEGEIVPQVLG
SDSDGDGILDAPAKESWSRFTPRVGVEYQVDNDLMFFASYSQGFKSGTYNPRATINEPAV
DPEVVDSFELGMKSDWNDNLRANVTLFALEHNDRQYISVLPVTSPEDLQQILGNVGKSKA
KGVEAEITYAATDELTFDVSLGYIDAEFEEVFQETLEGRVDVADTFAISNTPEYTANFAA
NYLLSTDMGDFVFNANYYYRDDYTITETSNSLITQDGYGLVNLSVSWQSEDGNWYGGIHA
KNLTDEEYVVGGYQFVVENPDDPTGYTAGTGGDNTLIGYYGDPRTISLTVGYRF
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgaataaacaacgattcacccaatcccttatcgctggcgctgttgcatcagtgttgtgt
taccaaccagcgttaatggctcaagaagcagataacgccactcaggctgagaaaaaaggg
ctagagcgtattgaagtcacagcgcgtaaaaccgtagaaagcctgcaagaagtgcctatt
tctgttacatctcttggtgccgttgagttagatgaaaagggaatttcggttatcactgaa
atccagcaattctcacccaataccactttgcaaaatagccgcggcaccaattcgacgctc
actgcgtttattcgtggtgtgggccaacaagatccactttggggttacgaaccaggcgtg
ggtatctacattgatgatgtttacgtggcgaggcctcaaggcgctgtattagatttactc
gatgttgaacgtattgaagtactccgcggcccacaaggcacgctatatggtaaaaatacc
ataggcggcgcgataaaatacgtgacgaagcccatgagcggcgaccccaccttgaacatt
caaggcaccgtaggcagctattcacagcgggatatcaagcttactgggcagtttcccgtc
atcgaagacaagctttatgtaggttttgggatcgcagatttaactcgcgacgggtatggt
gaataccttgaatcggctcttgaagggcaagacttagaaaactacaacaaagacttaacc
gcggctcgggtgacggtggaatttaccccatcagatgatttgttttttcgcttcgcgtgg
gacaaaaccgaagatgactctaatgccaaaggcggttatcgcttattgccaagtcgtttg
actgatgcccccgtacccaatagcgtatttgattcttacaccagtttacccactgaaaac
aatgttgagctcgaagggtatagcttgacggccaattgggatgtaaatgatgatatcagc
ttaaaatacataggcgcacatcgtgaaagttactcgccaaccaatattgattttgataac
acagccatagatatttttgatgtacccgccatttatgaagatgaaaatgacactcacgaa
ctgcaattagcatacgccggtgatgggtttaacgccgtgggaggtatttattattatgac
ggtgaatcgtgtggtcaatttgaagccatactgggctttcttggtcgcgccgcattcggc
gtacctggtttaacccgcgaagtgtctggctgtaacaacagcgaaagtattgccgcgtac
gtgcagtcatctattgatgtgaccgagcaactgtcattaacccttggcgcacgttatacc
gatgaagaaaagcaagccacagttcgcaatggtctaattttcgacaacgtatacccagag
tcgaactggatcccaggttacgtgcgcccagaaggtgaaatagtgccacaagttttgggc
agcgattctgacggtgacggtattttggatgctccagcaaaagaaagctggtcacgcttt
acaccccgcgtaggcgttgaatatcaagtggataatgatttgatgttttttgccagttat
tcacaaggctttaaatctggtacttacaatccaagagcgaccatcaacgagccagcggtc
gacccagaagtagtagattcgtttgagcttggcatgaaaagcgactggaacgataattta
cgggcaaatgttactttattcgctttagagcataacgaccgccagtacatctcagtgttg
cccgttacgtcacctgaagacttacaacaaatcttgggtaatgtgggtaaatctaaagcc
aaaggggttgaagctgaaattacttatgccgctaccgatgagctaacctttgatgtgtca
ctagggtacatcgatgctgaatttgaagaggtattccaagagacactggaagggcgagtc
gatgtagccgatacctttgctatctcgaacactcctgagtacacagccaatttcgctgct
aactacctacttagcacagacatgggcgattttgtttttaatgctaactactactaccgt
gatgactatacgattacggaaacgtcaaacagtttgatcacccaagacggatacggttta
gtcaacttaagcgtgtcgtggcaaagcgaggacggcaactggtatggtggcattcatgct
aaaaatctgaccgatgaggaatacgtagtgggtggctatcagtttgtggtagaaaaccct
gatgatcctacaggttatacagccggcacaggtggtgataatacgttaattggttattac
ggcgacccacgcacgatcagcttaacggttggctatcgcttttag
DBGET
integrated database retrieval system
